Marinobacterium sediminicola: LN244_14295
Help
Entry
LN244_14295 CDS
T07998
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
msec
Marinobacterium sediminicola
Pathway
msec01501
beta-Lactam resistance
msec02020
Two-component system
Module
msec_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN244_14295
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN244_14295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msec02000
]
LN244_14295
01504 Antimicrobial resistance genes [BR:
msec01504
]
LN244_14295
Transporters [BR:
msec02000
]
Other transporters
Pores ion channels [TC:
1
]
LN244_14295
Antimicrobial resistance genes [BR:
msec01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
LN244_14295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
ULG68846
LinkDB
All DBs
Position
complement(3130659..3131885)
Genome browser
AA seq
408 aa
AA seq
DB search
MKANKLPLALAALGMITSAPVMAADSDDGMKVNLDFRTFYMNRDFDQGIPDTIAAGQAFR
FELLSPYWNDMVGVDVSAVHVAKLEGDKTVNSSDVLTPEGDGYTTLEQAYLKLRPVENVD
LKLGRMILMTPLLNDLTSRISAPSTQGFYGEAKLGSGKLYAIYSDKASMNNSEKFNKYRA
ANGETYDIKSLGGTYDFGNGLSTHLQYAVADDYQKQLYLNASYTTKLADHDVLLDLTHMR
GEADGDLFVDENYDSNLTGLTGRLSKGNWAYTLAYQTIGGSDAYDQKWNDSDVVAADNTQ
FFTWGAVQLLDFNAKDEQSLQFRVDYDVPSVPGLHLMARHTESWDIDYAGGDDGQRRETN
FDAKYTLQDGAAKGLSLRLRVAHADGDAAVVPRINDIRFIAEYRTNLL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaataaacttccactggctctcgctgcgctgggcatgattacatcagcgcct
gtaatggcggctgacagtgatgacggcatgaaggtcaatctggacttccgtaccttctac
atgaatcgcgacttcgatcagggtatcccggatacgatcgcggcgggtcaggcgttccgc
tttgagctcctgtctccgtactggaatgacatggtcggcgtcgatgtctccgccgttcat
gtggccaagctggaaggcgacaagaccgtaaactcctctgacgtgctgacgccggaaggt
gatggctacaccacgctggaacaggcttacctgaagctgcgtccggtcgagaatgtcgac
ctgaaactgggtcgcatgattctgatgacgccgctgctgaacgacctgacgtcgcgcatc
tctgcaccgagcacccagggcttctacggtgaagccaaactgggcagcggcaagctgtat
gcgatctactccgataaggcgtcgatgaacaacagcgaaaagttcaataaataccgtgcc
gccaatggtgaaacctacgacatcaagtcactgggtgggacctatgacttcggtaatggc
ctgagtactcatctgcagtatgccgtggcggacgactaccagaagcagctttatctgaat
gcaagctacaccaccaagctggctgatcatgatgttttgttggatctgacccatatgcgt
ggtgaggcggatggcgacctgtttgtagatgaaaactatgacagcaacctgaccgggctg
accggtcgtctgtccaaaggcaactgggcatacacgctggcctaccagaccatcggtggc
agcgatgcatacgaccagaagtggaatgattcggatgtcgtcgcagccgataatacccag
ttctttacctggggtgctgtgcagctgctggacttcaatgccaaggatgaacagtcgctg
cagttccgtgtcgactacgatgtgccctccgttccgggtctgcacctgatggcccgtcat
accgagtcttgggatatcgactatgccggtggcgatgatggtcagcgccgtgaaaccaac
tttgacgccaagtacacgctgcaggacggtgccgccaaaggactgagtctgcgactgcgt
gtggcgcatgccgatggtgacgcggcggtcgtgccgcgtatcaacgatattcgtttcatc
gccgaatatcgcaccaacctgctgtaa
DBGET
integrated database retrieval system
