Marinobacterium sediminicola: LN244_14435
Help
Entry
LN244_14435 CDS
T07998
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LN244_14435 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_14435 (recD)
Enzymes [BR:
msec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LN244_14435 (recD)
DNA repair and recombination proteins [BR:
msec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LN244_14435 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_22
AAA_11
SH3_13
Helicase_RecD
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
AAA_16
PhoH
AAA_28
PIF1
NTPase_1
nSTAND3
HerA_C
Mg_chelatase
T2SSE
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ULG68874
LinkDB
All DBs
Position
complement(3160583..3162670)
Genome browser
AA seq
695 aa
AA seq
DB search
MAEQNDLFATESRLHAALTDWPSLEHLLQRWQARGWIRALDLALGRFLQELEPDTSPLVL
LAGVLASHQLGRGHICADIDNLLSAPDTALSLPPDGEFGEALPDRPVELLQGVGRSEWLA
ALRASSLVGAGDPATPLVLEPESTRLYLYRQWRYEVQVAERIAARLSPLPQPAAGLKPRL
SELFAPVEGRLDWQQLACALVAGRRFGIITGGPGTGKTTTVVRLLALLQSLARDDGRALR
IRLAAPTGKAAARLTESISGAVGQLPPHLQQDIPLEVTTLHRLLGARPGTRRFVHHADNP
LHADLIVVDEASMIDLEMMHQLLSALPNRARLILLGDKDQLASVEAGSVLGDLCEGADLG
GYTVETLNWLEGQTDQAVAEWQAAEGETSSQPLAQSIAMLRYSHRFGADSGIGALARAVN
SGQPEQVQQVLQAGYADLGVTILKGGEDRMLERLVLEGGHQAPAADGTAPEGYRHYLQQL
AALRPAEAAPESLDHWAREILEAFGRFQLLCALRRGPWGVEGLNDRIATALMKAGLIERS
EGWYEGRPVLVTRNDYGLGLMNGDIGITLAIPDGRDGQSLRVVFPLADGSLKWVLPSRLQ
AIETVYAMTVHKSQGSEFAHTALLLPPTANPVLTRELVYTGITRASRWFSLLLAHRGRLD
DAVRVRVRRASGLRSRLTESGSMVGDVARFSRWAF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagaatgatctcttcgcgactgaaagccgactgcatgctgcgctgacggac
tggccctcgctggagcatctgctgcagcgctggcaggcgcgtggctggattcgcgcactg
gatctggccctggggcgctttctgcaggagctggaaccggatacctcaccgttagtgctg
ctcgcaggtgtgctggccagtcaccagctcggacgtggtcatatctgtgccgatatcgac
aacctgctgtcagcaccggatacggcgctgtcactgccaccggatggcgagtttggtgag
gccctgccggatagaccggttgagctgctgcagggagttgggcgcagcgaatggctggcc
gctttgcgggcatcctcgctggtgggagccggtgatccggctacgccgctggtattggag
cccgagtcaacgcggctctatctctaccgccagtggcgctatgaagtacaggtcgccgag
agaattgccgcacgtctctcgccgctgccgcagccggcagccggattgaagccgcgactg
agcgaactctttgcaccggtagaaggacgtctcgactggcagcagctggcctgtgctttg
gtggccggtcgtcgtttcggcatcattaccggtggtccgggtaccggcaagaccaccacc
gtggtccgcctgctggcactgctgcaaagccttgcccgggatgatggtcgcgccctgcgt
attcgtctggctgcgccgaccggcaaggccgcggctcgcctgaccgagtcgatcagcggg
gcggttggacagctgccaccccacctgcagcaggatattccgcttgaagtcacgaccctg
catcgactgctgggagcccgtcccggcacgcgccgttttgtccatcatgcggataatccg
ctgcatgcggacctgatcgtggtcgatgaagcgtcaatgatcgatctggaaatgatgcat
cagctgctgtcagcattgccgaacagagcccgactgattctgctgggtgacaaggaccag
ctggcctcggttgaggccggctcggtgctgggggatctctgtgaaggggccgatctaggg
gggtacaccgtcgaaacgctgaactggctggaaggtcagaccgatcaggcagtggccgag
tggcaagccgccgagggggaaacctccagccaaccactggcacagtcgattgcgatgctc
aggtacagtcaccgttttggtgccgacagcggcatcggtgcgctggcgcgggcggtcaac
agcggtcagccggagcaggtacagcaggtgttgcaggcggggtacgccgacctcggagtg
accatactcaagggaggcgaggaccggatgctggagcggctggtgcttgagggcggtcat
caggcaccggctgctgacggtactgcccccgaagggtatcggcattatctgcagcagttg
gcagccttgcgtccggccgaagcggcaccggaaagcctcgaccattgggcccgcgagatt
ctggaagcctttgggcgctttcagctgttgtgcgcgctcaggcgaggcccctggggcgtc
gaagggcttaatgatcgtatcgccacggcactgatgaaagcggggctgatcgaacgatcg
gaaggctggtacgagggacgaccggtactggtgacccgcaacgactatggcctggggctg
atgaatggtgatattggcatcacactggcaatacctgatggccgtgacggacagagtttg
cgggtggtgtttccgctggcggatggctcgttgaagtgggtgcttcccagccgattacag
gcgattgaaaccgtgtatgccatgaccgtacacaagtcacaggggtcagagtttgcgcat
acggcgctgctgctgccaccgacagccaacccggtactgacacgggagctggtctatacc
ggtattacccgtgccagtcgatggttcagcctgctgctggcacacagagggcgactggat
gatgccgtgcgcgtgcgtgttcgtcgtgccagtggtttgagaagccgactgacggagtct
ggcagcatggtgggtgacgtcgccagattctcccgatgggctttttag
DBGET
integrated database retrieval system
