Marinobacterium sediminicola: LN244_14635
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Entry
LN244_14635 CDS
T07998
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msec03016
]
LN244_14635 (truB)
Enzymes [BR:
msec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LN244_14635 (truB)
Transfer RNA biogenesis [BR:
msec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN244_14635 (truB)
Prokaryotic type
LN244_14635 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ULG68909
LinkDB
All DBs
Position
complement(3213827..3214777)
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AA seq
316 aa
AA seq
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MARKPKGRPISGLFLLDKPQGLSSNSALQRVKRLYGAAKAGHTGALDPLATGLLPICLGE
ATKFSQYLLDSDKRYLTTAKLGQRTDTCDAEGQVIEEKPVPQDLSSEQIEALLEEHFKGE
IEQVPPVYSALKLNGQPLYKLARQGVEVEVKPRQVRIHEIRLLAVRDDEVDLEVFCSKGT
YIRSIVEDLGLLLGCGAHVTVLRRLQTGPFDASQMMTLEQLQSLAEPRGDEAENSIHQRL
DALLLPAWSPVAQLPALELTTEEADRIRVGQRFRAVNAGSLQGELRLFANGQDSFMGIGE
IGVDGVLKAKRLVSTV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaaaccaaaaggccgccctattagcggcctttttctgttggataagcctcag
ggattgtcctccaattcggcattgcagcgagtcaagcgtctctatggggctgcgaaggca
gggcataccggtgcactggatccattggcaacagggctgttgccgatctgtctgggggag
gcgaccaagttttcccagtacttgttggactctgacaagcgttacctgacaacggcgaag
ctggggcagcgcaccgatacctgtgatgccgaaggacaagtgatcgaggaaaagccagta
cctcaggatctgagctccgagcagattgaagccctgcttgaggagcatttcaagggtgaa
attgagcaggttccacccgtgtattcggcgctcaagctcaatggtcagccactgtataag
ctggcgcgacaaggggtcgaggtggaagtcaagccgcgtcaggttcgaatccacgagatc
aggctcttggctgtgcgtgatgatgaagtcgacctggaggtgttctgctccaagggaact
tatattcgcagcatcgttgaagatttgggcctgttgctcggctgtggtgcccatgtgacc
gtgctgagacgtctgcaaaccggtccttttgatgcctcgcagatgatgacgctggaacag
ttgcagagtctggcagaaccgcgtggtgacgaggccgaaaacagcatacatcagcgcctg
gatgcgttattattaccggcttggagtccggtggctcagttaccggctcttgaattgacg
acagaggaagcggaccgcattcgtgtggggcagcgctttcgtgccgtcaatgcaggctcg
cttcagggtgagctgcgtctttttgccaatgggcaagacagtttcatgggcatcggcgag
atcggtgtcgatggtgtactaaaggccaagcgcctggtgagcaccgtctga
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