Marinobacterium sediminicola: LN244_15430
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Entry
LN244_15430 CDS
T07998
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
msec
Marinobacterium sediminicola
Pathway
msec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN244_15430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msec03019
]
LN244_15430
Messenger RNA biogenesis [BR:
msec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LN244_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ULG69053
LinkDB
All DBs
Position
complement(3361689..3362180)
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AA seq
163 aa
AA seq
DB search
MIDADGFRPNVGIILVNSQGQVLWARRIGQNAWQFPQGGIQSSETPEQAMYRELGEEIGL
SPSDVEILAVTRGWLRYRLPKRMIRRHSHPVCVGQKQKWFLLRMLSDDSAVRIDHTDSPE
FDGWEWVSYWYPLGQVVSFKREVYRKAMKELSPRLARLQQAAH
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgcagatggattcagacccaatgtcggaatcattctggttaattcgcagggt
caggttctttgggcaagacgcatcgggcagaacgcctggcagttcccgcaaggtggtata
cagtcaagcgaaacacccgagcaggcgatgtatcgtgaactcggagaagagatcggactg
tcgccctcggatgtggaaattctggcggtaacgcgcggctggctgcgttatcgtctgccc
aagcgcatgatccggcgacactcgcaccctgtgtgtgtaggccagaaacagaagtggttc
ctgctgcgtatgctcagtgatgacagtgcagtgaggatcgatcataccgactcgcccgag
tttgacggctgggagtgggtcagctactggtatcctcttgggcaggtggtgtccttcaag
cgagaggtgtaccgtaaggcgatgaaggagctgtcgcccaggttggcgcgcctccagcag
gccgcacactaa
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