Marinobacterium sediminicola: LN244_15620
Help
Entry
LN244_15620 CDS
T07998
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec00300
Lysine biosynthesis
msec00470
D-Amino acid metabolism
msec01100
Metabolic pathways
msec01110
Biosynthesis of secondary metabolites
msec01120
Microbial metabolism in diverse environments
msec01230
Biosynthesis of amino acids
Module
msec_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LN244_15620 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LN244_15620 (lysA)
Enzymes [BR:
msec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LN244_15620 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ULG69088
LinkDB
All DBs
Position
complement(3395713..3396969)
Genome browser
AA seq
418 aa
AA seq
DB search
MDNFEYRNGRLHAEEVALSRIADEFGTPTYVYSRDALERAYLSYAQALEGRDALVCYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVLRAGGDPAKVVFSGVGKQPAEIRRALEAGIL
CFNIESDAELDRVNAVAGEMGVKAPVSFRVNPDVDAGTHPYISTGLKENKFGIAIETAVD
VYRRAAALEHVEVVGMDCHIGSQLTEVSPFLDAIDRLLVLLDTLAAEGIRIHHLDLGGGL
GVNYTDETPPTPGEYIAQVLQKLEGRDYKLIFEPGRSIAANAGVMLTRVEFLKQSGDKNF
AIIDGAMNDLIRPSLYGAYQEIVPAELREEGETQAWDLVGPVCETGDFLGKDRQLNLQPG
DLLAVCSAGAYGFVMASNYNTRPRPAEVMVDDNKVYLVRERETLNDLMRGEQLLPAQS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggacaatttcgaataccgcaatggtcgcctgcacgccgaagaggtagcgctgagccgc
atcgccgatgagttcggcacccccacctatgtttattcccgtgatgcgctggaacgtgcg
tatctgagctatgcgcaggcgctggaaggccgtgatgcgctggtttgctatgccgtcaag
gccaactccaatctggcggtcctgaacgtactggcgcgtctgggggccggtttcgacatt
gtttcagccggtgagctggaacgtgtgctgcgtgcgggtggcgatccggcgaaagtcgtg
ttttcaggtgttggcaagcagcccgccgagatccgtcgtgcacttgaagccggtattctc
tgcttcaacatcgagtccgatgccgagctggaccgagtcaacgccgtggcgggcgaaatg
ggcgtcaaggcgccggtttccttccgcgtcaacccggacgtggacgctggtactcatccc
tatatctccactggtctgaaggaaaacaagttcggcatcgccatcgaaacagcggtcgat
gtgtatcgccgtgccgccgcgctggagcatgttgaggtcgtgggtatggattgccacatt
ggcagccagctgaccgaggtcagccccttcctcgacgccatcgaccgcctgttggtgttg
ctggatacactggcggcagaaggtattcgcatccaccatctggatctgggtggtggtctg
ggtgtgaactacaccgacgagacaccgcctacgccaggcgaatacattgcgcaggtgctg
cagaagctggaaggtcgtgattacaagttgatctttgaaccgggacgttccatcgccgcc
aatgccggtgtgatgctgacccgtgtcgagttcctcaagcagagtggtgacaagaatttt
gccatcatcgacggtgccatgaatgacctgattcgtccgtcgctttacggtgcttatcag
gagattgtgccggccgagttgcgtgaggaaggtgagacccaggcctgggatctggtgggg
ccggtctgtgagaccggtgacttcctcggtaaggaccgtcagcttaacctgcagcccggc
gacctgctggcagtatgttctgccggtgcctatggctttgtcatggcgtccaactacaac
acccgcccgcgtccggccgaggtgatggtggatgacaacaaggtgtatctggtgcgcgag
cgtgaaaccctgaatgacctcatgcgtggcgagcagctgctgccggcacagtcctga
DBGET
integrated database retrieval system