Marinobacterium sediminicola: LN244_15975
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Entry
LN244_15975 CDS
T07998
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msec03021
]
LN244_15975 (rpoH)
Transcription machinery [BR:
msec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN244_15975 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
GntR
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ULG69155
LinkDB
All DBs
Position
complement(3469096..3469953)
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AA seq
285 aa
AA seq
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MGTSLQVVEQLSPGRNVDAYVQTVSAIPILSAEEERELAERLHYQSDLEAARQLVMSHLR
FVVHIARSYSGYGLPLGDLIQEGNVGLMKAVKRFDPTMGVRLVSFAVHWIKAEMHEFILR
NWRIVKIATTKAQRKLFFNLRSQKKKLSWMTNEEVEAVAEDLGVDAKTVRQMEGRLASTD
TAFDAPVGEDEDSSYLSPSAYLEDHSADPAVQLEEANWEEDSQRRLLCAMNALDERSRDI
LARRWLAEEKATLHELAAEYNVSAERIRQLEKNAMKKIRGAMLEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaagcttgcaagttgttgaacagctatcaccgggccgcaatgtcgatgcctat
gttcagactgtgagtgccatcccgatcctttccgcagaagaggaacgggaactggcagag
cgcctgcattaccagagcgatcttgaagcggcacgccagctggttatgtcgcacctgcgt
ttcgtggttcatattgcccgcagctattccggctatggtctgccgctgggcgatctgatc
caggaaggcaacgtcggcctgatgaaggccgtcaagcgtttcgacccgaccatgggcgtg
cgtctggtgtccttcgccgtacactggatcaaggccgaaatgcatgaattcattctgcgc
aactggcgaatcgtcaagattgccactaccaaggcccagcgcaagctgttcttcaacctg
cgttcgcagaagaaaaagctgagctggatgaccaatgaagaggtggaagcggtcgctgag
gatcttggtgtggatgccaagaccgtgcgtcagatggagggtcgcctggcgtccacggat
accgccttcgatgcaccggtgggtgaggatgaagacagcagctacctgtcaccctctgcc
tatctggaagatcattcggcggatccggccgtgcagctggaagaggccaactgggaggaa
gactctcagcgtcgactgctctgtgcgatgaatgcgctggatgagcgcagtcgtgacatt
ctggcgcgacgctggctggccgaagagaaggccacgctgcatgagctggcagccgaatac
aatgtgtctgccgagcgcatccgccagctggaaaaaaacgccatgaagaaaattcgcggc
gccatgctggaagcctga
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