Microbacterium sediminis: E3O41_01940
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Entry
E3O41_01940 CDS
T06576
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
msed
Microbacterium sediminis
Pathway
msed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3O41_01940 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msed01007
]
E3O41_01940 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msed03016
]
E3O41_01940 (lysS)
Enzymes [BR:
msed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
E3O41_01940 (lysS)
Amino acid related enzymes [BR:
msed01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E3O41_01940 (lysS)
Transfer RNA biogenesis [BR:
msed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E3O41_01940 (lysS)
Prokaryotic type
Other AARSs
E3O41_01940 (lysS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QBR73317
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All DBs
Position
403867..405387
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AA seq
506 aa
AA seq
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MSETPAENAAAEPEEDIFEQKAVRLAKRERLIAERDTPAGGAYPVSVPVTTTIGALRAQY
GDLEAGAETGQTASVAGRVVFSRNTGKLCFASLQAGDGSRIQAMVSLANVGDDSLARWKE
LVDLGDHVAVTGEIVSSRRGELSIMVSDWQIAAKAVLPLPNLYNDLNEETRVRQRYLDLI
VREQARTTVVARAKANASLRATFAEHDFLEVETPMLQVQPGGATARPFITHSNAFDTELY
MRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHSPEFAMLEAYQAYTDYNGIADLTQ
ELIQKAAVAVAGSTTVTWADGTEYDLGGEWDRVSMYPSLSEAAGVEVTPQTSMDELLALA
ERSGVEVPPHVTHGKLVEELWEHFVKAHLTRPTFVMDFPVDTSPLVREHRSIPGVVEKWD
LYVRGFELATGYSELVDPVIQRERFVEQAALADRGDDEAMRIDEDFLRALEHGMPPTGGM
GMGIDRLLMAITGLGIRETILFPLVK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacccccgccgagaacgccgccgccgagcccgaagaggacatcttcgagcag
aaggccgtgcgcctggcgaagcgcgagcggctcatcgccgagcgcgacacccccgcgggc
ggcgcgtacccggtgtcggtgccggtgacgaccacgatcggcgccctgcgcgcgcagtac
ggcgacctcgaggccggcgccgagacgggccagaccgcgtcggtggcgggccgcgtggtc
ttcagccgcaacaccggcaagctctgcttcgcgtcgctgcaggccggcgacggctcgcgc
atccaggcgatggtgtcgctcgcgaacgtcggcgacgactcgctcgcgcgctggaaggag
ctcgtggacctcggcgatcacgtcgccgtcacgggcgagatcgtctcgagccgtcgcggc
gagctgtcgatcatggtcagcgactggcagatcgcggccaaggccgtgctgcccctgccg
aacctctacaacgacctcaacgaggagacgcgggtccgccagcgctacctcgatctgatc
gtgcgcgagcaggcccgcaccacggtggtggcgcgtgccaaggcgaacgcgagcctgcgg
gcgaccttcgcggagcacgacttcctcgaggtcgagacgcccatgctgcaggtgcagccc
ggcggcgccaccgcccgccccttcatcacgcactcgaacgcgttcgacaccgagctgtac
atgcgcatcgcgccggagctgtacctcaagcgcgcggtcgtgggcggcatcgatcgcgtc
ttcgagatcaaccgcaacttccgcaacgagggcgccgactccacgcacagcccggagttc
gcgatgctcgaggcctaccaggcgtacaccgactacaacggcatcgccgatctcacccag
gagctgatccagaaggccgccgtcgcggtcgccgggtcgaccacggtgacctgggccgac
ggcaccgagtacgacctcggcggcgagtgggatcgcgtgtcgatgtacccgtcgctgtcg
gaggcggccggcgtggaggtcacgccgcagacgtcgatggacgagctgctggccctggcc
gagcgctcgggcgtcgaggtgccgccgcacgtgacccacggcaagctcgtcgaggagctg
tgggagcacttcgtcaaggcccacctgacgcgccccacgttcgtgatggatttccccgtc
gacacgagcccgctcgtgcgcgagcaccggtcgattcccggcgtcgtggagaagtgggac
ctctacgtgcgcggcttcgagctcgccacgggctactccgagctggtcgacccggtcatc
cagcgcgagcgcttcgtggagcaggcggccctggccgaccgcggcgatgacgaggccatg
cgcatcgacgaggacttcctgcgcgcgctcgagcacggcatgccgccgacgggcggcatg
ggcatgggcatcgatcgcctgctcatggcgatcaccggcctcggcatccgcgagacgatc
ctcttcccgctcgtcaagtaa
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