Microbacterium sediminis: E3O41_02470
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Entry
E3O41_02470 CDS
T06576
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
msed
Microbacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_02470
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3O41_02470
Archaeal homologous recombinant proteins
E3O41_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_15
YbjQ_1
Motif
Other DBs
NCBI-ProteinID:
QBR73403
UniProt:
A0A4P7FDJ8
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All DBs
Position
500445..503429
Genome browser
AA seq
994 aa
AA seq
DB search
MRIHRIEIEGFGPFRTRQTIDLDAYAADGIFLIGGRTGAGKSSILDAICFALYGSVPRYE
DGDKRLRSDHAQPEDPTEVAVEFTTGGRTWRIERSPDYLRPKKRGGGSTKQPAEARMFER
VGGQWIGRAARPVDVAQLVDEVIGLSQQQFLQVILLAQGRFARFLLAKNDERQALLRTLF
GTKRFEDYTQELEERRKDAMARVEARSQTLDAQLAEAERTAGELIDPADAEPALEERIER
LGRAALRARHLAESTDAAERTAAAALTAAEATHAERTAQRDAQQRRDAARLALAQLEARA
DEVDAVRAERDAAVRAEPVRGAKEAGERALAALAAATARRDEAREAWRAAGEADIAEGPE
ELDAFVAEAQQRIGAWRPLGEAEARLDAAAAALAELRSAAEAAAARAAELDERVGALPAE
RARVQDALDAATALAARAEALRASVGVLETQLAAARSIPERAEAQRQAYADLQQATRRKD
EAEAHLADLQRRRFAGMAGELAAELVEGEACAVCGSTSHPAPAERGDDAVSADDIAAADA
ARRDAAAAYEAANAALAAADRAHADAQKDAGGRTADDLEAELTAARAELRTADDARATRE
ALVQERAALEAEAAEHGARRDALIAERTQLDARIAAAAEALERDRAAVAEARGAAESVAA
RIRAEERHAALAAASAEAQREAARAEAAAAEAAERLQAAADEAGFAAVADALAALRGAGE
RDELDARVRAYDADLAATKATLMDLELEVLPDEPIDTAESAAAVAAAKAAWSVALAAHTE
AAQRARSLEDAVERIAAAHAQIAGLAAEAAAIRRLADTVAGRAPNARRMKLETFVLAAEL
EEIVAAANVRLAEMSGDRYRLQHSDALAARGAASGLGLEIMDRFTGRARPPHSLSGGETF
LASLALALGLAEVVTSRAGGIRLDTLFIDEGFGSLDAETLDVAMRTLDELRQGGRTVGII
SHVEAMKEQIPAQLRVEQTPQGWSVVRQEALAPL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccaccgcatcgagatcgaggggttcgggccgttccgcacgcggcagacgatc
gatctcgacgcgtacgccgccgacgggatcttcctcatcggcgggcgcaccggggcgggc
aagtcgagcatcctcgacgcgatctgcttcgccctctacggatcggtgccgcggtacgag
gacggcgacaagcgcctgcgcagcgatcacgcgcagccggaggacccgacggaagtggcc
gtcgagttcacgaccggcgggcgcacgtggcgcatcgagcggtcgcccgactacctgcgc
cccaagaagcgcggcgggggcagcacgaagcagcccgccgaggcgcgcatgttcgagcgc
gtcggcggccagtggatcggccgcgccgcgcgtcccgtcgacgtcgcgcagctcgtggac
gaggtgatcgggctcagccagcaacagttcctgcaggtgatcctgctggcccagggccgg
ttcgcgcggttcctgctcgccaagaacgacgagcgccaggcgctgctgcggacgctgttc
ggcaccaagcgcttcgaggactacacgcaggagctcgaggagcggcgcaaggacgccatg
gcccgggtcgaggcccgcagccagaccctcgacgcgcagctggcggaggccgagcgcacg
gcgggcgagctcatcgaccccgccgacgccgagcccgcgctcgaggagcggatcgagcga
ctgggccgggcggcgctgcgggcccgccacctggccgagagcaccgacgccgccgagcgg
acggccgccgccgccctcacggcggccgaggccacgcacgccgagcgcaccgcccagcgc
gacgcgcagcagcgccgcgacgccgcgcgcctcgccctggcgcagctcgaggcgcgcgcc
gacgaggtcgacgcggtccgggccgagcgcgacgcggccgtgcgggccgagcccgtgcgc
ggcgcgaaggaggccggggagcgggcgctggccgccctcgccgccgcgacggcgcggcgc
gacgaggcgcgcgaggcatggcgcgcggcgggggaggcggacatcgccgagggccccgag
gaactcgacgcgttcgtcgccgaggcgcagcagcggatcggcgcctggcgcccgctcggc
gaggccgaggcgcgcctcgacgccgccgccgccgcgctggccgagctgcgctccgccgcc
gaggccgccgcggcccgcgccgccgagctggacgagcgcgtgggcgcgctccccgccgag
cgcgcgcgcgtgcaggacgccctcgacgcggccaccgcgctcgcggcgcgcgccgaggcg
ctgcgcgcgtcggtcggcgtgctcgagacccagctggcggccgcgcgctcgatccccgaa
cgcgccgaggcgcagcggcaggcgtacgccgatctgcagcaggccacgcggcgcaaggac
gaggccgaggcccacctcgccgacctgcagcgccgccgattcgccggcatggcgggggag
ctcgcggccgagctcgtcgagggcgaggcctgcgccgtgtgcggctcgacgagccacccg
gccccggccgagcgcggcgacgatgccgtgtcggccgacgacatcgccgccgccgacgcc
gcgcgccgcgacgccgccgccgcgtacgaggccgcgaacgccgcgctcgccgccgccgac
cgcgcccacgccgatgcacagaaggacgccggcggtcgcacggccgacgacctcgaggcc
gagctcaccgccgcgcgcgccgagctgcggacggccgacgacgcccgggcgacccgggag
gcgctcgtccaggagcgagctgcgctcgaggcggaggccgccgagcacggcgcgcgccgc
gacgccctcatcgccgagcgcacgcagctcgacgcccgcatcgccgccgccgccgaggcg
ctcgagcgcgaccgtgcggcggtggccgaggcccgcggcgccgcggagtcggtcgcggcg
cgcatccgtgccgaggagcgccacgccgccctcgccgccgcctccgccgaggcacagcgc
gaggcggcgcgcgccgaggccgccgccgcggaggccgccgagcggctgcaggccgccgcc
gacgaggccgggttcgccgcggtggccgatgccctcgcggccctccgcggggcgggcgag
cgggacgagctcgacgcccgggtgcgcgcgtatgatgcggacctcgccgccaccaaggcc
acgctcatggacctcgagctcgaggtgctgcccgacgagcccatcgacaccgccgagagt
gccgccgccgtcgccgccgccaaggccgcgtggtcggtcgccctcgccgcgcacactgag
gccgcgcagcgtgcccgctcgctcgaggacgccgtcgagcggatcgcggcggcgcacgcg
cagatcgccggcctcgccgccgaggccgccgccatccgccgcctcgccgacaccgtcgcg
ggccgcgcgcccaacgccaggcgcatgaagctcgagacgttcgtgctcgcggccgagctc
gaggagatcgtcgccgcggccaacgtgcggctcgccgagatgtcgggcgatcgctaccgc
ctccagcacagcgatgcgctggccgcgcgcggcgctgcgagcgggctcgggctcgagatc
atggaccgcttcaccggccgcgcccggcccccgcactcgctgtccggcggcgagacgttc
ctcgcctccctcgccctcgcgctcggcctggccgaggtcgtcacgagccgggccggcggc
atccggctcgacacgctgttcatcgacgagggcttcggctcgctcgacgccgagaccctc
gacgtggcgatgcgcacgctcgacgagctgcgccagggcggccgcacggtgggcatcatc
agccacgtcgaggcgatgaaggagcagatccccgcccagctgcgcgtggagcagaccccg
cagggctggagcgtggtgcgccaggaggcgctcgccccgctctga
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