Microbacterium sediminis: E3O41_02775
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Entry
E3O41_02775 CDS
T06576
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
msed
Microbacterium sediminis
Pathway
msed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3O41_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msed03000
]
E3O41_02775
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_02775
Enzymes [BR:
msed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
E3O41_02775
Transcription factors [BR:
msed03000
]
Prokaryotic type
Helix-turn-helix
AraC family
E3O41_02775
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E3O41_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
QBR73455
LinkDB
All DBs
Position
566446..567909
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AA seq
487 aa
AA seq
DB search
MTLAMTFEERYRAIDARDARFDGQFVTAVRSTGIYCRPSCPARTPKPSNVTFYPTSAAAH
EAGYRACKRCLPEAAPGSPQWNLRGDVAARAMRLIADGVVEREGVAGLAARLGYSSRHLT
RLLTAELGAGPLALARAHRAHTARLLLVGTDLPATDVAFSAGFASVRQFNDTLREVFAMT
PLELRARRRGGPVATGIDLALPVRAPFDAAGLFAWMGARALPGMEEASATSFARTLRMPR
GAAWFRVRTEGARVRLEARLQHPGDLAALVSRVRRLFDLDADPHAVDAALAAHSELAPHV
RAVPGMRLPGAADPHEMLIRAMIGQQISVPAARTHLTRLVEALGERVELAGEQRLLFPTM
TAIAERGHEVLRGPAARIRAIVAVAGALASGEVVLTGADDPAQQRASLLALPGIGPWTAD
YVRMRVSGDPDVLLPGDVALRAGAAAAGVPADPAGLVAWGERVAPWRSYLSMHLWRLAAP
PKENTHV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggcgatgacgttcgaggagcggtaccgcgcgatcgatgcgcgtgacgcccgc
ttcgacgggcagttcgtcacggcggtgcgctcgaccggcatctactgccggccgagctgc
cccgcccgcacgccgaagccgtcgaacgtgacgttctacccgacgagcgccgcggcgcac
gaggcggggtatcgggcgtgcaagcgctgcctgcccgaggcggcgccggggtcgccgcag
tggaacctgcgcggcgacgtggcggcgcgcgcgatgcgcctcatcgccgacggcgtggtg
gagcgcgagggcgtggcggggctcgcggcgcggctcggatactccagccggcacctgacc
cggctgctcacggcggagctcggcgccggcccgctggcgctcgcgcgggcccaccgcgcg
cacacggcgcgcctgctgctcgtgggcaccgacctgccagcgacggacgtcgcgttctcg
gcggggttcgccagcgtgcggcagttcaacgacaccctgcgcgaggtgttcgcgatgacg
cccctcgagctgcgcgcccgccgccgcggcgggccggtggccaccgggatcgacctggcg
ctgccggtgcgcgcgcccttcgacgccgcgggcctgttcgcgtggatgggggcgcgcgcc
cttcccggcatggaggaggcgagcgcgacatcgttcgcccggaccctgcggatgccgcgc
ggcgccgcctggttccgcgtccgcaccgagggcgcgcgcgtgcgcctggaggcccggctg
cagcacccgggggatctcgccgcgctcgtctcgcgcgtgcgccgcctgttcgacctcgat
gccgatccccacgcggtcgacgcggccctcgccgcccactccgagctcgcgccccacgtg
cgcgcggtgccgggcatgcggctcccgggcgccgccgatccgcacgagatgctgatccgc
gccatgatcggccagcagatcagcgtgcccgccgcccgcacccacctcacccgcctcgtc
gaggcgctcggcgagcgcgtcgagctcgcgggggagcagcggctgctgtttcccaccatg
acggcgatcgccgagcgcggccacgaggtcctccgcggaccggcggcgcgcatccgcgcg
atcgtcgcggtggccggcgcgctggcgtcgggcgaggtggtgctcacgggagcggacgat
ccggcgcagcagcgcgcgtcgctgctcgcgctgcccggcatcgggccctggaccgccgac
tacgtgcgcatgcgggtcagcggcgaccccgacgtgctgctgcccggcgacgtggcgctg
cgcgcgggtgccgcggccgcgggcgtgccggccgatccggcgggcctggtcgcctggggc
gagcgcgtggccccgtggcgctcctacctgtcgatgcacctgtggcgcctggccgcccca
ccgaaggagaacacccatgtctga
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