Microbacterium sediminis: E3O41_03900
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Entry
E3O41_03900 CDS
T06576
Name
(GenBank) ATP-grasp domain-containing protein
KO
K11263
acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.4.1.-
6.3.4.14
]
Organism
msed
Microbacterium sediminis
Pathway
msed00061
Fatty acid biosynthesis
msed00074
Mycolic acid biosynthesis
msed00280
Valine, leucine and isoleucine degradation
msed00620
Pyruvate metabolism
msed00630
Glyoxylate and dicarboxylate metabolism
msed00640
Propanoate metabolism
msed01100
Metabolic pathways
msed01110
Biosynthesis of secondary metabolites
msed01120
Microbial metabolism in diverse environments
msed01200
Carbon metabolism
msed01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
E3O41_03900
00630 Glyoxylate and dicarboxylate metabolism
E3O41_03900
00640 Propanoate metabolism
E3O41_03900
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E3O41_03900
00074 Mycolic acid biosynthesis
E3O41_03900
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
E3O41_03900
Enzymes [BR:
msed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
E3O41_03900
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
E3O41_03900
6.4.1.3 propionyl-CoA carboxylase
E3O41_03900
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
LAL_C2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QBR73646
LinkDB
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Position
complement(815714..817486)
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AA seq
590 aa
AA seq
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MSDPRALRKVLIANRGEIAVRIIRAARDAGLGSVAVYADQDRDALHAKLADEAYALGGET
SAETYLRIDKILAVARRSGADAVHPGYGFLAENAEFARAVIGAGLVWIGPSPEAIEALGD
KVTARHVAEKVGAPLAPGTPGPVDTAEEVVAFAREVGLPIAIKAAYGGGGRGLKVARELD
EIPELFESATREAIAAFGRGECFVEKYLDKPRHVETQCLADAEGNVVVISTRDCSLQRRH
QKLVEEAPAPFLTEEQNRILYEASKAILREVGYTGAGTCEFLIGADGTISFLEVNTRLQV
EHPVSEEVTGIDLVREQFRIAAGGTIDYDDPAPTGHSIEFRLNGEDPGRGFLPQPGPIHV
FKTFGGPGIRLDSGVTAGDTVSGAFDSLLAKIIVTGKDRAEALERARRALDEFEIAGLPT
VLPFHRKVVREPAFTAEDGRFGVYTRWIETEFDNDIPAWDGEPEPLPAPVGRHTVVVEVA
GKRLEVSLPDRLAAPASAGRPAVAPPSRRSHTATVTSGASGDAVKSPMQATVVKVAVEEG
QSVVKGDLVVVLEAMKMEQPLQAHKDGVISAVDATPGATVPAGHQLLQIV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccccgtgcgctccgcaaggtcctcatcgccaaccgcggcgagatcgccgtc
cgcatcatccgcgccgcgcgcgacgccggtctcggatcggtcgccgtgtacgccgatcag
gaccgcgacgccctgcacgccaagctcgccgacgaggcctacgcgctcggcggcgagacg
agcgccgagacgtacctgcgcatcgacaagatcctcgccgtcgcccgccgctcgggcgcc
gacgcggtccaccccggctacggcttcctcgccgagaacgccgagttcgcccgtgcggtc
atcggcgccgggctcgtctggatcggcccgtcgcccgaggcgatcgaggcgctcggcgac
aaggtcaccgcccgccacgtggccgagaaggtcggcgccccgctcgcccccggcaccccc
ggtcccgtcgacaccgccgaggaggtcgtcgccttcgcccgcgaggtcggcctgccgatc
gcgatcaaggccgcctacggcggcggcggtcgcggcctcaaggtcgcgcgcgagctcgac
gagatccccgagctgttcgagtcggccacccgcgaggccatcgccgcgttcggtcggggc
gagtgcttcgtcgagaagtacctcgacaagccgcgccacgtcgagacccagtgcctcgcc
gacgccgagggcaacgtcgtcgtcatctccacgcgcgactgctcgctgcagcgccgccac
cagaagctcgtcgaggaggcgcccgcgccgttcctcaccgaggagcagaaccgcatcctc
tacgaggcgtccaaggcgatcctgcgcgaggtcggctacaccggcgccggcacctgcgag
ttcctcatcggcgccgacggcacgatctcgttcctcgaggtcaacacccgcctgcaggtc
gagcaccccgtctccgaggaggtcacgggcatcgatctggtccgcgagcagttccgcatc
gccgcgggcggcacgatcgactacgacgaccccgcgccgaccggccactcgatcgagttc
cgcctcaacggcgaggaccccggccgcggcttcctgccccagcccggtccgatccacgtg
ttcaagacgttcggcggccccggcatccgcctcgactcgggcgtgaccgccggcgacacc
gtcagcggcgccttcgactcgctgctggcgaagatcatcgtgaccggcaaggatcgcgcc
gaggcgctcgagcgcgcccgccgcgcgctcgacgagttcgagatcgccggcctgcccacc
gtgctccccttccaccgcaaggtggtgcgcgagcccgccttcaccgccgaggacggccgg
ttcggcgtgtacacgcgctggatcgagaccgagttcgataacgacatcccggcctgggac
ggcgagcccgagccgctgcccgcgcccgtcggccgccacaccgtggtcgtcgaggtcgcc
ggaaagcgcctcgaggtgagcctgcccgaccgcctcgcggcgcccgcgtcggccggacgg
cccgcggtggctcccccgtcgcgccgctcgcacaccgcgaccgtcacgagcggtgcctcg
ggcgacgccgtgaagtcgcccatgcaggccacggtcgtcaaggtcgccgtcgaggagggc
cagtcggtcgtgaagggcgacctcgtggtcgtgctcgaggcgatgaagatggagcagccg
ctgcaggcgcacaaggacggcgtcatctcggccgtcgacgcgacgccgggcgccacggtc
cccgccggccaccagctcctgcagatcgtctga
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