Microbacterium sediminis: E3O41_04990
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Entry
E3O41_04990 CDS
T06576
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
msed
Microbacterium sediminis
Pathway
msed02020
Two-component system
msed02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3O41_04990
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E3O41_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msed03021
]
E3O41_04990
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
msed02035
]
E3O41_04990
Transcription machinery [BR:
msed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3O41_04990
Bacterial motility proteins [BR:
msed02035
]
Flagellar system
Flagellar assembly proteins
Stator
E3O41_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma70_r3
HTH_10
HTH_23
Fe_dep_repress
GntR
HTH_AsnC-type
HTH_Tnp_ISL3
KORA
MarR_2
HTH_Tnp_1
HTH_5
P22_Cro
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QBR73841
LinkDB
All DBs
Position
complement(1049085..1049888)
Genome browser
AA seq
267 aa
AA seq
DB search
MTRSERDQLIVDNLPLVGYLAAELHARATHIPREELAAAGALALVTAADAFDPELGVPFG
AYARRRILGAFADEMRSMDWASRGIRRRVKETTAVRDALATGLGRTPTTEEIASAMGVDT
ATVAESLADAARTVTSIDEPDVHEVAAVAPLPEEAAITGERHELLEHAISALPERMQLIV
RAVYFEDRPVKDVAAELGVSHSAVSQQRSEALRLLRDAMDRYFPDEPVASATPTSRVSAS
AREAYFDRIAAGGRRFAHAFLPRAAEA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgttcggagcgcgatcaactcatcgtcgacaacctccccctggtcggctacctg
gccgcagagctccatgcgcgtgccacccacatcccccgcgaggaactcgccgcggcgggc
gccctcgccctcgtcaccgcggcggacgcgttcgatcccgagctgggcgtgcccttcggc
gcctacgcccgccgccgcatcctcggcgccttcgccgacgagatgcgatcgatggactgg
gcatcgcgcggcatccgccgtcgcgtgaaggagaccacggcggtgcgcgacgccctcgcc
accggcctcggccgcacgccgaccaccgaggagatcgccagcgccatgggcgtcgacacc
gccacggtggccgagagcctggccgacgctgcgcggacggtcacgagcatcgacgagccc
gacgtgcacgaggtcgcggcagtcgcgccgctgcccgaggaggccgccatcacgggcgag
cgccacgagctgctcgaacacgcgatctcggctctgccggagcgcatgcagctcatcgtg
cgcgccgtgtacttcgaggaccgccccgtgaaggacgtcgccgcggagctgggcgtctcg
cactccgcggtctcgcagcagcgctcggaggcgctgcgcctgctgcgcgacgccatggac
cgctacttccccgacgagccggtcgcctcggccacgcccacctcgcgcgtgtcggcctcg
gcccgcgaggcgtacttcgaccgcatcgcggccggcgggcggcgcttcgcccacgccttc
ctgccgcgcgccgccgaggcctga
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integrated database retrieval system
