Microbacterium sediminis: E3O41_05170
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Entry
E3O41_05170 CDS
T06576
Name
(GenBank) ribose-phosphate pyrophosphokinase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
msed
Microbacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msed03009
]
E3O41_05170
03016 Transfer RNA biogenesis [BR:
msed03016
]
E3O41_05170
Enzymes [BR:
msed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
E3O41_05170
5.4.99.29 23S rRNA pseudouridine746 synthase
E3O41_05170
Ribosome biogenesis [BR:
msed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3O41_05170
Transfer RNA biogenesis [BR:
msed03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
E3O41_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QBR75390
UniProt:
A0A1B9NJ52
LinkDB
All DBs
Position
1087659..1088672
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AA seq
337 aa
AA seq
DB search
MRRNAALPPRDGIAAARLRAPGGRETHDAAHLPVPATVREWLVDVVIPTTMGREQAFGQQ
PLDPEYFVGEGALVDAAGAPVALDDPVRPGGFYWFHKPIPYEDRVPFEVRIVHEDDDLLV
VDKPHFLASTPNGVFVRECVVTRLRVQRGEDDLVAIHRLDRVTAGLLVLSRRPQTRGAYQ
VLFQRRGIEKVYRALAWLPRGWTPGEPLPLGLESGDEREVRSRLLKVDGERPVREIPGEP
NAHTSVRLVRTFRHGDAWAGEFVLTPHTGKTHQLRVHMNGLGMPLLGDPVYPVDLGPDPY
DFRHTLQLLAERLAFDDPITGERREFVSGLSLDPARA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ctgcgacgcaacgccgccctgccgccgcgcgacgggatcgccgcggcgcggctgcgcgcc
cccggcgggcgcgagacacacgatgccgcgcaccttcccgtccccgccaccgtgcgcgag
tggctcgtcgacgtcgtcatccccaccacgatgggccgcgagcaggccttcggccagcag
ccgctggatccggagtacttcgtcggggagggcgcgctcgtcgacgccgccggcgcgccg
gtggcgctggatgaccccgtgcggcccggcgggttctactggttccacaagccgatcccg
tacgaggaccgggtgccgttcgaggtgcggatcgtgcacgaggacgacgacctcctcgtc
gtcgacaagccgcatttcctcgcgtccacccccaacggcgtcttcgtgcgcgagtgcgtg
gtcacccggctgcgcgtgcagcggggcgaggacgacctcgtggccatccaccggctcgac
cgcgtgacggcggggctgctcgtgctctcgcggcgcccgcagacgcgcggcgcctaccag
gtgctgttccagcgtcgcgggatcgagaaggtctaccgcgcgctcgcctggctgccgcgc
gggtggacgcccggcgagccgctgccgctcgggctcgagagcggcgacgagcgcgaggtg
cgcagccgcctgctcaaggtcgacggcgagcggccggtgcgcgagatccccggcgagccg
aacgcgcacacgtcggtgcgtctcgtgcgcacgttccggcacggcgatgcgtgggcgggg
gagttcgtgctcacgccgcacacgggcaagacccaccagctgcgcgtgcacatgaacggc
ctcggcatgccgctgctgggcgatcccgtctacccggtcgatctcgggcccgacccgtac
gacttccgccacacgctgcagctgctggccgagcggctcgcgttcgacgacccgatcacc
ggcgaacggcgcgagttcgtcagcggcctctcgctcgacccggcgcgcgcctga
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