Microbacterium sediminis: E3O41_05705
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Entry
E3O41_05705 CDS
T06576
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msed
Microbacterium sediminis
Pathway
msed03420
Nucleotide excision repair
msed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E3O41_05705
03430 Mismatch repair
E3O41_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_05705
Enzymes [BR:
msed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3O41_05705
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3O41_05705
MMR (mismatch excision repair)
Other MMR factors
E3O41_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QBR73967
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All DBs
Position
1194195..1195928
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AA seq
577 aa
AA seq
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MSALDALDEHQREAAEMLRGPVAVLAGAGAGKTRVITHRIAYGVDTGAYSPQRVMALTFT
TKAAGELRGRLRALGVDGVAARTFHSAALAQLNFFWPTVAGDVAPKIIDNKVRMLAHAAD
GIGLKPDTATLRDVASQIEWRKITMRSIEQYGQLGRTVGSLGTDALVALMRAYEALKDER
RQIDFEDVLLACAGLLEAEPRVAASVREQYRHFTVDEYQDVSPLQNHLLELWVGERRDLC
VVGDASQTIYSFAGADSRFLLDFGRRYPDATVVRLERNYRSDPAVLEVANALMRGRPGAL
TLVAARGEALSPTPTVADYDDETAEAAGVAAAIERQLTQARPDEIAVLYRSHAQSAVLQQ
ALSARGIPTTVLGGTRFFDLPEVRQAVLALRGAAVAPQQHTEFVDIVREVLRSLGHTAEP
PAAGGALRDAWESRQALLRLAEEARPGTTLRTFADDLVARAKDQHEPSLRTVTLATIHAA
KGLEWPHVHLVGLSEGLLPISYATTLEQVDEERRLAYVGITRAARTLSLSWARGSGRTPR
QPSRFLAEIAGPRGPGGTGILRAVDGSATAAASARRR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgctcgacgccctcgacgagcaccagcgggaggcggcggagatgctgcgcggc
cccgtcgcggtgctcgcgggagcgggcgcgggcaagacgcgcgtgatcacgcaccgcatc
gcgtacggcgtcgacacgggcgcgtactcgccgcagcgcgtcatggcgctgaccttcacg
accaaggcggcgggggagctgcgcgggcggctgcgcgcgctcggcgtcgacggcgtggcg
gcgcgcacgttccactccgccgcgctcgcgcagctgaacttcttctggccgaccgtggcg
ggcgatgtcgcgccgaagatcatcgacaacaaggtgcggatgctcgcgcatgccgccgac
gggatcggcctgaagcccgacacggcgacgctgcgcgacgtcgcctcgcagatcgagtgg
cgcaagatcacgatgcgttccatcgagcagtacgggcagctcggccgcaccgtcggctcg
ctcggcaccgacgcgcttgtggcgctcatgagggcgtacgaggcgctcaaggacgagcga
cgccagatcgatttcgaggacgtgctgctcgcgtgcgccggcctgctggaggccgagccg
cgcgtcgccgcctcggtgcgcgagcagtaccggcacttcaccgtggacgagtaccaggac
gtctccccgctgcagaaccacctgctggagctgtgggtcggcgagcgccgcgacctgtgc
gtggtcggcgacgccagccagacgatctactccttcgccggcgccgactcgcgcttcctg
ctggacttcggccgccgctacccggacgcgaccgtcgtgcgcctggagcgcaactaccgc
tcggatccggccgtgctcgaggtcgccaacgcgctcatgcgcggccggccgggggcgctc
acgctcgtcgccgcgcggggcgaggcgctctcgcccaccccgacggtggccgactacgac
gacgagaccgccgaggccgccggcgtggccgcggcgatcgagcgccagctcacgcaggcc
cgccccgacgagatcgccgtgctgtaccgatcgcacgcgcagtcggcggtgctgcagcag
gcgctgtcggcgcgcggcatcccgaccaccgtgctggggggcacccggttcttcgatctg
cccgaggtgcgtcaggcggtgctcgcgctgcgcggggcggcggtggcgccgcagcagcac
accgagttcgtcgacatcgtgcgcgaggtgctgcgcagcctgggccacaccgccgagccg
ccggccgcgggcggggccctgcgcgacgcgtgggagtcgcgccaggcgctgctccggctc
gccgaggaggcgcggcccggcaccacgctgcgcaccttcgccgacgatctggtggcccgc
gccaaggaccagcacgagccgtcgctgcgcaccgtgaccctcgccacgatccacgccgcc
aagggcctggaatggccgcacgtgcatctcgtgggcctgtcggaggggctgctgccgatc
tcgtacgcgacgaccctcgagcaggtcgacgaggagcggcggctggcgtacgtgggcatc
acgcgggccgcgcgaacgctgtcgctgtcgtgggcgcgcgggtcggggcggacgccgcgt
cagccgtcgcgcttcctcgccgagatcgcgggaccgcggggaccaggcggcacaggcatt
ctgcgtgcggtcgatgggagcgccaccgccgccgcgagcgctcgccgacgctga
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