Microbacterium sediminis: E3O41_05955
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Entry
E3O41_05955 CDS
T06576
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
msed
Microbacterium sediminis
Pathway
msed02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3O41_05955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msed02000
]
E3O41_05955
Transporters [BR:
msed02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E3O41_05955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QBR74009
LinkDB
All DBs
Position
1256296..1257960
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AA seq
554 aa
AA seq
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MTRPFRSLAGRALRATAAIAIVAGLITGCAGGTSGGGSDGGEGAGGTLTYLEPQTWTTLY
PPAAGFYPNGGIVNNITDRLLYQNPETLELEPWIATELPEVNADATEYTFTLREGVTYSD
GTPLDAENVVKNFDLFGKGDPDRALTASEAINNYDHGEVIDDHTVRFHFSAPAPGFAQAV
STINSGLLSNATLDKTNEEFGPGNATTIIGSGPFVIADEQIGTQVSLKAREDYDWAPPSL
EHQGRALLDGIDIVLASESSVRVGTVVADQADIARQIDAPDEAQFAADGLTLHAATTNGV
NNGFSFRFRNELLSDIRVRQAIIAGVDREAIVDTLFTDSYPLATGALAKTALGYLDTSEY
YAYDPGRAAQLLDEAGWTVGSDGIREKDGQKLSLTFNEALPQPRSKDVVTLVQEQLAQLG
IEVNLFPGDQAAQTEAALSADTIQVYHSMVGRADFDVLKSQFSSDNRNTLLNRDNTDDSV
GDPELDALLAAVASAPTVEERQAASEAAQLHIAENAYFLPLFEEPQVFGLRADVQGFATE
SVGRPSFYATSLDR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtcccttccgctccctcgctggccgtgccctgcgcgcgaccgccgcgatcgcc
attgtcgcggggctgatcacgggctgcgcgggtggcacctcgggcggcggtagtgacggg
ggagagggcgcgggcggcacgctcacgtacctcgagccgcagacgtggaccacgctgtac
ccgccggccgcgggcttctacccgaacggcggcatcgtcaacaacatcaccgaccggctg
ctgtaccagaaccccgagacgctcgagctcgagccgtggatcgccacggagctgcccgag
gtcaacgccgacgccaccgagtacacgttcacgctccgtgagggcgtgacctactcggac
ggcacgccgctggacgccgagaacgtcgtgaagaacttcgacctgttcggcaagggcgac
cccgaccgcgccctgacggcgtcggaggcgatcaacaactacgaccacggcgaggtgatc
gacgatcacaccgtccgcttccacttctccgcccccgccccgggcttcgcgcaggccgtg
tcgacgatcaactcgggcctgctgtcgaacgcgacgctcgacaagacgaacgaggagttc
ggtcccggcaacgcgacgacgatcatcggatcgggtccgttcgtgatcgccgacgagcag
atcggcacccaggtgagcctcaaggcgcgcgaggactacgactgggcgccgccgtcgctc
gagcaccagggtcgcgccctgctcgacggcatcgacatcgtgctcgcgagcgagagcagc
gtccgcgtcggcaccgtcgtggccgaccaggccgacatcgcgcggcagatcgacgcgccc
gacgaagcgcagttcgccgccgacggcctcaccctccacgccgccacgacgaacggcgtg
aacaacggcttcagcttccgcttccgcaacgagctcctctccgacatccgggtgcgtcag
gcgatcatcgccggcgtcgaccgcgaggcgatcgtcgacaccctgttcaccgacagctac
ccgctcgcgaccggcgcgctggcgaagaccgcgctgggctacctcgacacgtcggagtac
tacgcctacgaccccgggcgggcggcgcagctgctcgacgaggccggctggacggtcgga
tcggacggcatccgcgagaaggacggccagaagctgtcgctcaccttcaacgaggcgctg
ccgcagccgcgatcgaaggacgtcgtcacgctcgtgcaggagcagctcgcccagctcggc
atcgaggtgaacctgttccccggcgaccaggccgcgcagaccgaggcggccctctcggcc
gacacgatccaggtgtaccactcgatggtcggccgcgcggacttcgatgtgctgaagtcg
cagttctcgtcggacaaccgcaacacgctcctcaaccgcgacaacaccgacgacagcgtc
ggcgacccggagctcgacgcgctgctggcggcggtcgcgtccgccccgacggtcgaggag
cgccaggcggcgtcggaggcggcccagctgcacatcgccgagaacgcgtacttcctgccg
ctgttcgaggagccgcaggtgttcggcctgcgcgccgatgtgcagggcttcgccaccgag
tcggtgggccgcccgtcgttctacgcgacctcgctcgaccgctga
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