Microbacterium sediminis: E3O41_06510
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Entry
E3O41_06510 CDS
T06576
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
msed
Microbacterium sediminis
Pathway
msed00220
Arginine biosynthesis
msed00240
Pyrimidine metabolism
msed00250
Alanine, aspartate and glutamate metabolism
msed01100
Metabolic pathways
msed01110
Biosynthesis of secondary metabolites
msed01240
Biosynthesis of cofactors
Module
msed_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
E3O41_06510 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
E3O41_06510 (carB)
00220 Arginine biosynthesis
E3O41_06510 (carB)
Enzymes [BR:
msed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
E3O41_06510 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATP-grasp_5
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_3
CoA_binding_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QBR74104
LinkDB
All DBs
Position
1372536..1375829
Genome browser
AA seq
1097 aa
AA seq
DB search
MPKRDDINSVLVIGSGPIVIGQACEFDYSGTQACRVLREEGVRVILVNSNPATIMTDPDF
ADATYVEPITPEVIETIIAKERPDAILPTLGGQTALNAAMALHARGILEKYDVELIGAKV
DAIRKGEDRQIFKQLVIDAGADVARSAIAHTMDEVLAAAEELGYPLVVRPSFTMGGLGSG
FAHNEEELRRMAGQGLRESTTTEVLLEESILGWKEYELELMRDTADNTVVVCSIENVDPV
GVHTGDSITVAPALTLTDREYQKLRDIGIDIIRAVGVDTGGCNIQFAVNPENGRIIVIEM
NPRVSRSSALASKATGFPIAKLAAKLALGYRLDEVPNDITKVTPASFEPTLDYVVVKVPR
FAFEKFPAADPTLTTTMKSVGEAMAIGRNYTTALQKALRSVEKRGSSFHWGEQMRTVESL
LESIQTPTDGRIVDVQQALRLGASVEQVFEATKIDPWFLDQIVLINEVADAVAAAGELDE
RVLRLAKEHGFSDAQIAQLRGIAETEVRALRHRLGLRPVFKTVDTCAGEFPALTPYHYSS
YDFETEVTPSERKKVVIIGSGPNRIGQGVEFDYSCVQASFALGAAGYETVMVNCNPETVS
TDYDTSDRLYFEPLTLEDVLEVLHAESLSGEIHGVVCQLGGQTPLGLAKGIEEAGYRILG
TSPAAIDLAEDRKLFGEILERGGLMAPRNGTATTEDEAVRIAEEIGYPVLVRPSFVLGGR
GMEIVYDTANLRDYFARIAEHAIIGADAPLLVDRFLDDAVEIDVDALFDGDDLYIGGIME
HLEEAGIHSGDSSCALPPMSLGKGEIDRVREATRAIAAGVGVRGLLNVQFAISAGVLYVI
EANPRASRTVPFVSKALGLPMAQAASRIMAGETIAQLKAEGLLPAQDGSVVPIDSPVSVK
EAVLPFKRFRTQDGKIVDSVLGPEMRSTGEAMGIDKNFPIAFAKSQSAAYGGIPSEGTVF
ISVADADKRDVILPAHRLHQLGFEILATEGTAEILRRNGIPVELVAKYSDTQGSDETNVV
DLINEGRVDIVVNTPSGMSARADGYEIRAAAVAADKALFTTIVTLGAAVSAMDATRGGYE
VKSLQEYAADRAARVVA
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgcgacgacatcaactccgtcctcgtcatcggatccggcccgatcgtcatc
ggccaggcctgcgagttcgactactcggggacccaggcgtgccgcgtgctgcgcgaggag
ggcgtgcgcgtcatcctcgtcaactcgaacccggccacgatcatgaccgacccggacttc
gccgacgccacctacgtcgagccgatcacccccgaggtcatcgagacgatcatcgccaag
gagcgccccgacgcgatcctgccgacgctcggcggccagaccgcgctgaacgccgccatg
gcgctgcacgcccgcggcatcctcgagaagtacgacgtggagctcatcggcgcgaaggtc
gacgcgatccgcaagggcgaggaccggcagatcttcaagcagctggtgatcgacgccggc
gccgacgtggcccgcagcgcgatcgcccacacgatggacgaggtcctcgccgccgccgag
gagctcggctacccgctcgtcgtgcgcccgtccttcacgatgggcgggctcggctcgggc
ttcgcgcacaacgaggaggagctgcgccgcatggccggccagggcctgcgcgagtcgacc
accaccgaggtgctcctggaggagtcgatcctcggctggaaggagtacgagctcgagctc
atgcgcgacacggccgacaacacggtcgtcgtctgctcgatcgagaacgtcgacccggtc
ggcgtgcacaccggcgactcgatcaccgtggcgcccgcgctcacgctgaccgaccgcgag
taccagaagctgcgcgacatcggcatcgacatcatccgcgccgtgggcgtggacaccggc
ggttgcaacatccagttcgcggtgaaccccgagaacggccgcatcatcgtcatcgagatg
aacccgcgcgtgtcgcgctcgtcggcgttggcctcgaaggcgacgggcttcccgatcgcc
aagctcgcggccaagctggcgctgggctaccgcctcgacgaggtgcccaacgacatcacg
aaggtcacgccggcctcgttcgagcccacgctcgactacgtcgtcgtgaaggtgccccgc
ttcgcgttcgagaagttcccggccgccgaccccaccctcaccacgaccatgaagtcggtg
ggcgaggcgatggcgatcggccgcaactacaccacggcgctgcagaaggcgctgcgctcg
gtcgagaagcgcggatcctcgttccactggggcgagcagatgcgcaccgtggagtcgctg
ctggagtcgatccagacgcccaccgacggccgcatcgtcgacgtgcagcaggcgctgcgc
ctgggcgccagcgtcgagcaggtgttcgaggccacgaagatcgacccctggttcctcgac
cagatcgtgctcatcaacgaggtcgccgacgccgtcgccgcggcgggcgagctcgacgag
cgcgtgctgcgcctggccaaggagcacggcttctcggacgcccagatcgcgcagctgcgc
ggcatcgccgagaccgaggtccgcgccctgcggcaccggctcggcctgcgcccggtgttc
aagaccgtcgacacctgcgccggcgagttcccggccctcacgccgtaccactactcgtcg
tacgacttcgagaccgaggtcacgccgtccgagcgcaagaaggtcgtcatcatcggctcg
ggccccaaccgcatcgggcagggcgtcgagttcgactactcgtgcgtgcaggcgtcgttc
gcgctcggcgcggccggctacgagaccgtgatggtcaactgcaaccccgagacggtctcg
accgactacgacacctccgaccgcctctacttcgagcccctcaccctcgaggacgtgctc
gaggtgctgcacgccgagtcgctctcgggcgagatccacggcgtggtgtgccagctcggc
ggccagacgccgctgggcctggccaagggcatcgaggaggccggctaccgcatcctcggc
acgagccccgcggcgatcgacctggccgaggaccgcaagctgttcggcgagatcctcgaa
cgcggcggcctcatggccccgcgcaacggcacggcgacgaccgaggacgaggccgtgcgc
atcgccgaggagatcggctacccggtgctcgtgcgtccctcgttcgtgctcggcggccgc
ggcatggagatcgtctacgacacggcgaacctgcgcgactacttcgcccgcatcgcggag
cacgcgatcatcggcgccgatgcgccgctgctcgtggaccgcttcctggacgacgcggtc
gagatcgacgtcgacgcgctcttcgacggcgacgacctctacatcggcggcatcatggag
cacctcgaggaggccggcatccactcgggcgactcgagctgcgcgctgccgccgatgtcg
ctcggcaagggcgagatcgatcgcgtgcgcgaggcgacgcgggcgatcgccgcgggcgtg
ggcgtgcgcggcctgctcaacgtgcagttcgcgatcagcgcgggcgtgctctacgtcatc
gaggccaacccgcgcgccagccgcacggtgccgttcgtgtcgaaggccctgggtctgccc
atggcgcaggcggcgagccggatcatggcaggcgagacgatcgcgcagctgaaggccgag
ggcctgctgcccgcgcaggacggctcggtcgtgccgatcgactccccggtgtcggtcaag
gaggcggtgctgccgttcaagcggttccgcacccaggacggcaagatcgtcgactcggtc
ctcggcccggagatgcgctccacgggcgaggcgatgggcatcgacaagaacttcccgatc
gccttcgccaagagccagtccgcggcctacggcggcatcccgagcgagggcaccgtgttc
atctcggtcgccgacgccgacaagcgcgatgtcatcctgccggcccaccgcctgcaccag
ctcggcttcgagatcctcgccaccgagggcacggcggagatcctgcgccgcaacggcatc
cccgtcgagctcgtcgccaagtacagcgacacccagggctcggacgagacgaacgtggtc
gacctcatcaacgagggccgcgtggacatcgtcgtgaacacgcccagcggcatgtcggcg
cgcgccgacgggtacgagatccgcgccgccgccgtggccgccgacaaggcgctgttcacg
acgatcgtcacgctcggtgcggccgtcagcgcgatggacgccacccgcggcggctacgag
gtgaagagcctgcaggagtacgccgccgatcgcgcggcacgggtggtcgcctga
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