Microbacterium sediminis: E3O41_06535
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Entry
E3O41_06535 CDS
T06576
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
msed
Microbacterium sediminis
Pathway
msed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3O41_06535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_06535
Enzymes [BR:
msed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3O41_06535
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3O41_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DZR
Motif
Other DBs
NCBI-ProteinID:
QBR75422
LinkDB
All DBs
Position
1379234..1381210
Genome browser
AA seq
658 aa
AA seq
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MARVLIDSPLPQLDRLFDYAIPAELDAQAQPGVRVKAPLRTAGRVIEGFVIERGVESDVD
RVLSELDAVVSPAPVLPERLYRLARKVADRAAGSASDVLRLAVPKRMVRAEKAWLAGERC
AAPALTATASAHAEAVLAEYPGLGERIDAGARLALDAPPTLVTLGDDTVPAWALLLAAAA
AHCLAAGRSAIIAVPDHRDLDLLHLALSSLVPADALVRHDAGQSGPGRYAGYLRTLEEAP
CVVIGNRSAVYAPVSSPGLVALWDDGDPLFDEPLAPYVHARDAALVRQELDGCALVFAGH
TRTSDVQRLVSIGWVEELAPARRTSPKIVLSPIREEERGARVPSAAFRAAREALEHGPVL
VQVARPGFAPSLVCADCRAPARCPACGGPLHARSRGAVPVCGWCGRSAHAWACPKCQSVR
VRLASSGSERTADELGRAFAGTRVIVSDGAHPVTEVDDRPALVVATRGAEPIARGGYRAI
VLLDGERMLQSPDLRIGEACLRWWSNAAALAAPDAPVHLVGVNGPVARALASWTQPAYAR
QEVADRAPLHLPPAARVARLEGDAAAVDRALAALREAVPDLPAEAILGPVPAEADGVPRA
RALLRFDYGRGPRVTASLRASVVAEAVANRGRRTGGAGRRPAARNTLAVRVDIADPEL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgcgtgctgatcgactcgcccctgccgcagctcgaccggctgttcgactacgcc
atccccgccgagctcgacgcgcaggcgcagcccggcgtgcgggtgaaggcgccgctgcgc
acggccgggcgggtgatcgaggggttcgtcatcgagcgcggcgtcgagagcgacgtcgac
cgcgtgctctccgagctcgacgccgtcgtctcgcccgcgcccgtgctgccggagcggctc
taccggctcgcccggaaggtggccgatcgcgcggcggggtccgcgtccgacgtgctgcgg
ctggcggtgcccaagcgcatggtgcgcgccgagaaggcgtggctggcgggggagcggtgc
gctgccccggcgctcacggccaccgcgagcgcgcacgccgaggcggtgctggccgagtac
cccgggctcggcgagcggatcgacgccggcgcgcgcctcgcgctcgacgcgccgccgacg
ctcgtgacgctcggcgacgacacggtgccggcctgggcgctgctgctcgccgcggccgcc
gcgcactgcctggccgccgggcgctcggcgatcatcgccgtgcccgaccaccgcgatctc
gatctgctccacctcgcgctgtcgtcgctcgtgcccgcggacgccctcgtccgccacgac
gccggccagtccggcccggggcgctacgccggctacctgcgcacgctcgaggaggcgccg
tgcgtggtgatcggcaaccgctccgccgtgtacgcccccgtgtcgtcgccggggctcgtg
gccctgtgggacgacggcgacccgctgttcgacgagccgctggcaccgtacgtgcacgcc
cgcgacgcggccctcgtgcgccaggagctcgacggatgcgccctcgtgttcgcgggccac
acccgcacgagcgacgtgcagcgcctcgtctcgatcggctgggtcgaggagctcgccccc
gcgcgccgcacgagcccgaagatcgtgctcagccccatccgcgaggaggagcgcggcgcc
cgcgtgccctccgccgcgttccgcgccgcgcgcgaggcactcgagcacgggccggtgctc
gtgcaggtcgcgcgccccggtttcgcgccgagcctcgtctgcgccgactgccgcgcgccc
gcccggtgcccggcgtgcggcggcccgctgcacgcgcgctcccgcggcgccgtgcccgtg
tgcggctggtgcggtcgctcggcgcacgcgtgggcgtgcccgaagtgccagtcggtccgc
gtgcggctggcatcgtccggcagcgagcgcaccgccgacgagctcggccgcgccttcgcc
ggcacgcgcgtcatcgtctcggacggcgcccaccccgtcaccgaggtcgacgatcgcccc
gccctcgtcgtcgccacccgcggcgccgagccgatcgcgcgcggcggctaccgcgcgatc
gtgctgctcgacggcgagcgcatgctgcagtcgcccgacctgcgcatcggcgaggcgtgc
ctgcggtggtggtcgaacgccgcggccctcgccgcgcccgacgcgccggtgcacctcgtc
ggcgtgaacgggcccgtcgcccgtgccctggcgtcgtggacgcagccggcctacgcgcgc
caggaggtcgccgaccgcgcgccgctgcacctgccgcccgcggcgcgtgtggcgcgcctc
gagggtgacgccgccgcggtggaccgcgcgctggcggcgctgcgcgaggcggtgcccgat
ctgcccgccgaggcgatcctcgggcccgtgccggccgaggccgacggcgtgccgcgcgcc
cgcgcgctcctccgcttcgactacggccggggcccgcgcgtgaccgcgtcgctgcgggca
tccgtcgtggcggaggcggtcgccaaccgcggtcgccgcacgggcggcgccggtcgccgc
cccgcggcgcgcaatacactcgcagtgcgggtcgacatcgccgatcccgagctgtga
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