KEGG   Microbacterium sediminis: E3O41_06645
Entry
E3O41_06645       CDS       T06576                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
msed  Microbacterium sediminis
Pathway
msed03030  DNA replication
msed03410  Base excision repair
msed03420  Nucleotide excision repair
msed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E3O41_06645 (polA)
   03410 Base excision repair
    E3O41_06645 (polA)
   03420 Nucleotide excision repair
    E3O41_06645 (polA)
   03440 Homologous recombination
    E3O41_06645 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msed03032]
    E3O41_06645 (polA)
   03400 DNA repair and recombination proteins [BR:msed03400]
    E3O41_06645 (polA)
Enzymes [BR:msed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E3O41_06645 (polA)
DNA replication proteins [BR:msed03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     E3O41_06645 (polA)
DNA repair and recombination proteins [BR:msed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     E3O41_06645 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E3O41_06645 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_2
Other DBs
NCBI-ProteinID: QBR74127
LinkDB
Position
1402425..1405052
AA seq 875 aa
MTDSAKPTLLVVDGHSLAYRAFFALPVENFSTKDGQHTNGIYGFLSMFVNLLKAEKPTHV
AVAFDTSRESFRTREYAEYKATRSETPAEFKGQIPLLQECLDAMGVTVLTKPDYEADDIL
ATLATRGENEGWNVLVCSGDRDTIQLVTDGVTLLYPSVQGVSQLKRYDPQTVRERYGVEP
AMYPDIAALVGETSDNLPGVPKVGEKTAVKWLTQFGSLDAVLEGADTIKGVVGGNLREHL
DDVRRNRRLNRLLRDVELPVGLDDLKIKPLDGQAVRDIFARLEFRALLPRVFEAAGAPAE
EEPAAPIAQAPAPVQLDAEALAAWVANAQGEVGVTVTLLGGQPDRLGLATADEVVEAAWG
DDVATALGPWFASDAPKVMSDAKPQIKALARGGVSLAGLAFDALLAGWLLRPSFPDKTLG
HLVERLLGEKLPEADPSQLVPETEGATPGQLSWFTLRVTEALREEMPESVARVLTDIELP
TVATLAAMELAGVAVSHAKLSEFSGELGARAETIAQEAYAAIGREVNLGSPKQLQEVLFE
ELQLPKTRKTKTGYTTDAASLADLQEKAHHPFLDLLLRHREATKLKQIIDGLDAAIDSTG
RVHTTYVQTGSQTGRLSSTDPNLQNIPVRTEESKRIRAAFEVGAGYETLLTADYSQIEMR
IMAHLSGDPGLVEAFNSGEDLHRFVGSRVFGVDPADVTPEMRTKVKAMSYGLVYGLSAFG
LAKQLRIDQTEAKKLMLDYFARFGAVRDYLRASVEAAREVGYTETIFGRRRPFPDLKSPN
RQLRENAERAALNAPIQGSAADIMKIALFRIHEDLRAHESRVLLQIHDELVIEVAPGEWD
VVEAIVRDRMGSAAELSVPLDVQVGRGADWNEAAH
NT seq 2628 nt   +upstreamnt  +downstreamnt
gtgacggactccgcaaagcctacccttctggtcgtcgacggccattccctcgcataccgg
gcgttcttcgcgctcccggtcgagaacttctcgacgaaggacggccagcacaccaacggg
atctacggcttcctgtcgatgttcgtcaacctcctcaaggccgagaagccgacccacgtg
gccgtcgccttcgacacctcgcgcgagtcgttccgcacccgcgagtacgcggagtacaag
gccacgcggtccgagacgccggcggagttcaagggccagatcccgctgctgcaggagtgc
ctcgacgccatgggcgtcaccgtgctgaccaagcccgattacgaggccgacgacatcctc
gccaccctcgcgacgcgcggcgagaacgagggctggaacgtgctcgtgtgctccggcgat
cgcgacacgatccagctcgtcaccgacggcgtcacgctgctgtacccctccgtgcagggc
gtctcgcagctcaagcgctacgacccgcagacggtccgcgagcgctacggcgtggagccg
gccatgtatcccgacatcgccgccctcgtcggcgagacgagcgacaacctgccgggcgtg
cccaaggtgggcgagaagacggccgtgaagtggctgacgcagttcggctcgctcgatgcg
gtcctcgagggcgccgacacgatcaagggcgtcgtcggcggcaacctccgcgagcacctc
gacgacgtgcgccgcaaccggcgcctcaaccgcctgctgcgcgacgtggagctgccggtc
ggcctggacgacctcaagatcaagccgctcgacgggcaggccgtgcgcgacatcttcgcg
cgcctggagttccgcgcgctcctgccgcgggtgttcgaggcggccggggcgccggccgaa
gaggagccggcggcgccgatcgcgcaggctcccgcgccggtgcagctcgacgccgaggcg
ctggccgcgtgggtggcgaacgcgcagggcgaggtgggcgtgacggtcacgctgctcggc
ggccagcccgatcggctcggcctggccacggccgacgaggtcgtcgaggccgcgtggggc
gacgacgtcgccaccgcgctcggcccgtggttcgcctcggacgcgcccaaggtcatgagc
gacgccaagccgcagatcaaggcgctggcgcgcgggggagtgagcctcgcggggctggcc
ttcgacgcgctgctggccggctggctgctgcggccgtcgttccccgacaagaccctgggc
cacctcgtcgagcgcctgctcggcgagaagctgcccgaggccgacccgtcgcagctcgta
cccgagacggagggcgccacgcccggtcagctgtcgtggttcacgctgcgggtcaccgag
gcgctgcgcgaggagatgccggagtcggtcgcccgcgtgctcaccgacatcgagctgccc
actgtggcgacgctggccgcgatggagctcgcgggcgtggccgtctcgcacgccaagctc
tcggagttctcgggcgagctcggcgcccgcgccgagaccatcgcgcaggaggcctacgcg
gcgatcggccgcgaggtgaacctcggctcgcccaagcagctgcaggaggtgctcttcgag
gagctgcagctccccaagacgcgcaagacgaagaccggctacaccaccgacgccgcctcg
ctggccgacctgcaggagaaggcgcaccacccgttcctcgacctgctgctgcgccaccgc
gaggccaccaagctcaagcagatcatcgacggcctcgacgccgcgatcgactcgaccggc
cgcgtgcacaccacctacgtgcagacgggcagccagaccggtcggctgtcgagcaccgac
cccaacctgcagaacatccccgtgcgcacggaggagtccaagcgcatccgggcggcgttc
gaggtcggcgcggggtacgagacgctgctgacggccgactactcgcagatcgagatgcgg
atcatggcgcacctgtcgggcgatcccgggctcgtcgaggcgttcaactccggcgaggac
ctgcaccggttcgtcggctcgcgggtgttcggcgtcgatccggccgatgtcacgcccgag
atgcgcacgaaggtgaaggccatgtcgtacggcctcgtctacgggctctcggcgttcggc
ctggccaagcagctgcgcatcgaccagaccgaggccaagaagctcatgctggactacttc
gcccgcttcggcgcggtgcgcgactacctgcgcgcgtccgtcgaggcggcccgcgaggtc
ggttacaccgagacgatcttcgggcgccggcgaccgttccccgacctgaagagccccaac
cgccagctgcgcgagaacgccgagcgcgcggcgctcaacgcgccgatccagggcagcgcg
gccgacatcatgaagatcgcgctgttccgcatccacgaggacctgcgcgcacacgagtcg
cgggtgctgctgcagatccacgacgagctcgtgatcgaggtcgccccgggcgagtgggac
gtcgtcgaggcgatcgtccgcgatcgcatgggatcggccgccgagctgtcggtgccgctg
gatgtgcaggtcggccgcggggccgactggaacgaagccgctcactga

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