Microbacterium sediminis: E3O41_06645
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Entry
E3O41_06645 CDS
T06576
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msed
Microbacterium sediminis
Pathway
msed03030
DNA replication
msed03410
Base excision repair
msed03420
Nucleotide excision repair
msed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3O41_06645 (polA)
03410 Base excision repair
E3O41_06645 (polA)
03420 Nucleotide excision repair
E3O41_06645 (polA)
03440 Homologous recombination
E3O41_06645 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msed03032
]
E3O41_06645 (polA)
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_06645 (polA)
Enzymes [BR:
msed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3O41_06645 (polA)
DNA replication proteins [BR:
msed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E3O41_06645 (polA)
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E3O41_06645 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3O41_06645 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QBR74127
LinkDB
All DBs
Position
1402425..1405052
Genome browser
AA seq
875 aa
AA seq
DB search
MTDSAKPTLLVVDGHSLAYRAFFALPVENFSTKDGQHTNGIYGFLSMFVNLLKAEKPTHV
AVAFDTSRESFRTREYAEYKATRSETPAEFKGQIPLLQECLDAMGVTVLTKPDYEADDIL
ATLATRGENEGWNVLVCSGDRDTIQLVTDGVTLLYPSVQGVSQLKRYDPQTVRERYGVEP
AMYPDIAALVGETSDNLPGVPKVGEKTAVKWLTQFGSLDAVLEGADTIKGVVGGNLREHL
DDVRRNRRLNRLLRDVELPVGLDDLKIKPLDGQAVRDIFARLEFRALLPRVFEAAGAPAE
EEPAAPIAQAPAPVQLDAEALAAWVANAQGEVGVTVTLLGGQPDRLGLATADEVVEAAWG
DDVATALGPWFASDAPKVMSDAKPQIKALARGGVSLAGLAFDALLAGWLLRPSFPDKTLG
HLVERLLGEKLPEADPSQLVPETEGATPGQLSWFTLRVTEALREEMPESVARVLTDIELP
TVATLAAMELAGVAVSHAKLSEFSGELGARAETIAQEAYAAIGREVNLGSPKQLQEVLFE
ELQLPKTRKTKTGYTTDAASLADLQEKAHHPFLDLLLRHREATKLKQIIDGLDAAIDSTG
RVHTTYVQTGSQTGRLSSTDPNLQNIPVRTEESKRIRAAFEVGAGYETLLTADYSQIEMR
IMAHLSGDPGLVEAFNSGEDLHRFVGSRVFGVDPADVTPEMRTKVKAMSYGLVYGLSAFG
LAKQLRIDQTEAKKLMLDYFARFGAVRDYLRASVEAAREVGYTETIFGRRRPFPDLKSPN
RQLRENAERAALNAPIQGSAADIMKIALFRIHEDLRAHESRVLLQIHDELVIEVAPGEWD
VVEAIVRDRMGSAAELSVPLDVQVGRGADWNEAAH
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgacggactccgcaaagcctacccttctggtcgtcgacggccattccctcgcataccgg
gcgttcttcgcgctcccggtcgagaacttctcgacgaaggacggccagcacaccaacggg
atctacggcttcctgtcgatgttcgtcaacctcctcaaggccgagaagccgacccacgtg
gccgtcgccttcgacacctcgcgcgagtcgttccgcacccgcgagtacgcggagtacaag
gccacgcggtccgagacgccggcggagttcaagggccagatcccgctgctgcaggagtgc
ctcgacgccatgggcgtcaccgtgctgaccaagcccgattacgaggccgacgacatcctc
gccaccctcgcgacgcgcggcgagaacgagggctggaacgtgctcgtgtgctccggcgat
cgcgacacgatccagctcgtcaccgacggcgtcacgctgctgtacccctccgtgcagggc
gtctcgcagctcaagcgctacgacccgcagacggtccgcgagcgctacggcgtggagccg
gccatgtatcccgacatcgccgccctcgtcggcgagacgagcgacaacctgccgggcgtg
cccaaggtgggcgagaagacggccgtgaagtggctgacgcagttcggctcgctcgatgcg
gtcctcgagggcgccgacacgatcaagggcgtcgtcggcggcaacctccgcgagcacctc
gacgacgtgcgccgcaaccggcgcctcaaccgcctgctgcgcgacgtggagctgccggtc
ggcctggacgacctcaagatcaagccgctcgacgggcaggccgtgcgcgacatcttcgcg
cgcctggagttccgcgcgctcctgccgcgggtgttcgaggcggccggggcgccggccgaa
gaggagccggcggcgccgatcgcgcaggctcccgcgccggtgcagctcgacgccgaggcg
ctggccgcgtgggtggcgaacgcgcagggcgaggtgggcgtgacggtcacgctgctcggc
ggccagcccgatcggctcggcctggccacggccgacgaggtcgtcgaggccgcgtggggc
gacgacgtcgccaccgcgctcggcccgtggttcgcctcggacgcgcccaaggtcatgagc
gacgccaagccgcagatcaaggcgctggcgcgcgggggagtgagcctcgcggggctggcc
ttcgacgcgctgctggccggctggctgctgcggccgtcgttccccgacaagaccctgggc
cacctcgtcgagcgcctgctcggcgagaagctgcccgaggccgacccgtcgcagctcgta
cccgagacggagggcgccacgcccggtcagctgtcgtggttcacgctgcgggtcaccgag
gcgctgcgcgaggagatgccggagtcggtcgcccgcgtgctcaccgacatcgagctgccc
actgtggcgacgctggccgcgatggagctcgcgggcgtggccgtctcgcacgccaagctc
tcggagttctcgggcgagctcggcgcccgcgccgagaccatcgcgcaggaggcctacgcg
gcgatcggccgcgaggtgaacctcggctcgcccaagcagctgcaggaggtgctcttcgag
gagctgcagctccccaagacgcgcaagacgaagaccggctacaccaccgacgccgcctcg
ctggccgacctgcaggagaaggcgcaccacccgttcctcgacctgctgctgcgccaccgc
gaggccaccaagctcaagcagatcatcgacggcctcgacgccgcgatcgactcgaccggc
cgcgtgcacaccacctacgtgcagacgggcagccagaccggtcggctgtcgagcaccgac
cccaacctgcagaacatccccgtgcgcacggaggagtccaagcgcatccgggcggcgttc
gaggtcggcgcggggtacgagacgctgctgacggccgactactcgcagatcgagatgcgg
atcatggcgcacctgtcgggcgatcccgggctcgtcgaggcgttcaactccggcgaggac
ctgcaccggttcgtcggctcgcgggtgttcggcgtcgatccggccgatgtcacgcccgag
atgcgcacgaaggtgaaggccatgtcgtacggcctcgtctacgggctctcggcgttcggc
ctggccaagcagctgcgcatcgaccagaccgaggccaagaagctcatgctggactacttc
gcccgcttcggcgcggtgcgcgactacctgcgcgcgtccgtcgaggcggcccgcgaggtc
ggttacaccgagacgatcttcgggcgccggcgaccgttccccgacctgaagagccccaac
cgccagctgcgcgagaacgccgagcgcgcggcgctcaacgcgccgatccagggcagcgcg
gccgacatcatgaagatcgcgctgttccgcatccacgaggacctgcgcgcacacgagtcg
cgggtgctgctgcagatccacgacgagctcgtgatcgaggtcgccccgggcgagtgggac
gtcgtcgaggcgatcgtccgcgatcgcatgggatcggccgccgagctgtcggtgccgctg
gatgtgcaggtcggccgcggggccgactggaacgaagccgctcactga
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