Microbacterium sediminis: E3O41_06975
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Entry
E3O41_06975 CDS
T06576
Name
(GenBank) DUF11 domain-containing protein
KO
K20276
large repetitive protein
Organism
msed
Microbacterium sediminis
Pathway
msed02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3O41_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
DUF7619
NPCBM_assoc
CARDB
VWA
Motif
Other DBs
NCBI-ProteinID:
QBR74182
LinkDB
All DBs
Position
complement(1470207..1474622)
Genome browser
AA seq
1471 aa
AA seq
DB search
MTATSGARRAAATMRAAALLALLSLLLAGVSALTAAPAAAALATPHSPSPNAGAPGPAPQ
AIADGRIAIEVRAGGDRDGASNAVLPLAGAQFAAYDVGSVDADVSERTPVAWCTTDASGS
CWMDLPARTGPEGSDRGYLVQAEAAPAGWTVNTRFRAGYTPWNPAPYRFHTGDSGDGAQP
YLVPGPGEGPTASAGRWMFTRANPVIAPSCGLDVALLVDLSRSVANAGGTDELRAASLSF
LDALTGTPSRLAVHTFAAASPSGAGNLGWQSVADPGGTGVATARAMLQGLTPSTTGGTNW
DAGLRSLAPLAGDADLAIVLTDGNPTLALNPSVGDATMTRFLEIEHAIASANSVKAAGTR
VVAVGIGDGTTGVPDNLQAISGHADGDQYSVAGFGEVAAILAELAGANCAGVVNVTKTEV
SADGATTAPGAGWEFTARAAGPTVQLDSSTGGFDAVAAGLTSANGGIGFRSLFAGTTPES
RRLTITETGRDGFTLAGARCWLGADASATVPITPRADGFEVDPVEGETVNCEVRNQRRPA
EPPPTHDVGIDKVSVTAEGSVEPGETFDYTLTVTNHGTAAATGVVVTDPLPDRLRLLSVS
LPEGWTQEDGATPEDLVFRAATLPVGASVGITVTVQLEPVAVEATNDTAQSPDDDLPAPL
APLGSVDLVNVADVDADLDENPDNNRDDDVLPIRELAAQVLIRCVADAPYLVFSVATTSN
LASQPVTMRWFPVDAAGAPVAATPADAGLGEVDTGRTYVVPWPGAAVSPGGVSVDWPGWR
PLQESDYGSDEELLPGSNVWNGLIEDDGEADHPWRERTAIVFAVNPELTITATYPPADPD
CAVPMETELVVEKTASTPIVEPGDDFRYEIALRNVHDHGAAGGVVLTDEIPDDIAVTAIS
TSATAFPRWTGCAVAGADPAGYGGTLTCELFGPLAAGQQAPSVTLDATLRATTPDIEFVN
VAVVDYHAFNDPGDVGRTTDDAIVRTEHLDDVGIDKSNALGPDGSVEAGDVFDYTITVTN
HGTRTATGVVVTDELPDRLRPVAVTLPDGWINDAPGGLLTDGVLTVRTGELAVGASAVIV
LTVEVLPVEVQVGSDTGTIDELPSPLLPLDDAVIRNEAVVSADADDDPSNNRDDDEVPTR
DITTMALVRCVADAPYLIFSVNTTPNVTGPISMNWVPLDAEGEPVPTATPADAGLDEVQR
GEVYVLPWPGAEFSQGGAAIDWPGWRPLTADDLDADGQPLPGLNVFNGLVEDVSEGDYAW
RGQTRVTFQVNPETTFTAGYPPATPECVVPMATELDIEKTASVDVVAGGTAFDYTIEVTN
VHDYGAAAGIVLTDEIPDTIRVTDVDAGAADAFPRWEDCAVTGADARGYGGELRCELFGP
LRAGQAAPTVTLSARVAPDVGAETITNVAVVDYHTADDPTDVGRAVDDAVVRTQLAVTGG
TIAWGAGAFGLLAAAAGLLLVRRRGRVRADG
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgtccggtgcacgccgagcggccgcgaccatgcgcgcggcggccctgctg
gcgctgctgagcctcctgctcgcgggcgtgagcgccctcaccgccgcgcccgccgccgcc
gcgctcgccacgccgcacagcccgagcccgaacgccggcgcacccggacccgcgccgcag
gcgatagcggacggccgcatcgcgatcgaggtgcgtgccggcggggatcgcgacggggcg
tccaacgcggtgctgcccctcgcgggggcgcagttcgccgcctacgacgtgggctcggtc
gacgccgacgtgtcggagcggacgccggtcgcctggtgcacgaccgacgcctcgggcagc
tgctggatggacctgcccgcgcggacgggccccgagggcagcgaccggggctacctcgtg
caggccgaggcggcgcccgccggctggaccgtcaacacccggttccgcgccggctacacg
ccgtggaaccccgcgccgtaccggttccacacgggcgactcgggcgacggcgcgcagccg
tacctcgtcccgggcccgggggaggggccgaccgcgagcgcgggccgatggatgttcacc
cgggcgaacccggtgatcgccccgtcgtgcggcctcgacgtggcgctgctcgtcgacctg
tcgcgctccgtcgcgaacgccggcggcaccgacgagctgcgcgccgcctcgctgtcgttc
ctcgacgccctgacgggcacgccctcgcgcctggccgtccacaccttcgccgccgcgagc
ccgtcgggagcgggcaacctcggctggcagtccgtcgccgacccgggcggcaccggcgtg
gccaccgcgcgggcgatgctgcaggggctcacgccttcgacgacgggcggcacgaactgg
gacgcgggcctgcgcagtctcgccccgctggcgggcgatgcggacctggcgatcgtgctc
acggacggcaacccgaccctcgcgctgaacccgtcggtgggcgacgcgaccatgacgcgg
ttcctcgagatcgagcacgcgatcgcctcggccaacagcgtcaaggccgccgggacccgc
gtcgtggcggtcggcatcggcgacggcaccaccggcgtccccgacaacctccaggcgatc
agcggtcacgccgacggcgaccagtactcggtggccggcttcggcgaggtcgccgcgatc
ctcgccgagctggcgggcgcgaactgcgccggggtcgtcaacgtcaccaagaccgaggtg
tcggccgacggcgcgaccaccgcgcccggcgccggctgggagttcacggcccgcgcggcg
ggaccgacggtgcagctggacagctccacgggcgggttcgacgccgtcgcggcggggctg
accagcgcgaacggcgggatcggcttccgctcgctgttcgccggcaccacccccgagtcg
cgccggctgacgatcaccgagaccggccgggacggcttcaccctggcgggcgcccgctgc
tggctgggcgccgacgcgtcggcgacggtgccgatcacgccgcgcgccgacggcttcgag
gtcgacccggtcgagggcgagaccgtcaactgcgaggtgcgcaaccagcgccgtccggcg
gagcccccgcccacccacgacgtggggatcgacaaggtgagcgtgacggccgagggatcg
gtcgagccgggggagaccttcgactacaccctcaccgtgaccaaccacggcacggcggcc
gccaccggcgtcgtcgtgaccgacccgctgccggatcgcctgcggctgctgtcggtctcg
ctgccggaggggtggacgcaggaggacggcgcgaccccggaggatctcgtcttccgcgcg
gcgacgctgcccgtgggggcgagcgtgggcatcacggtgaccgtgcagctggagccggtc
gcggtcgaggcgacgaacgacaccgcgcagagcccggacgacgatctccccgccccgctc
gcgcccctcggctcggtggacctcgtgaacgtggccgacgtcgacgccgacctcgacgag
aaccccgacaacaaccgcgacgacgacgtgctgccgatccgggagctggccgcgcaggtg
ctgatccgctgcgtggccgacgccccgtacctcgtcttcagcgtcgccacgacgagcaac
ctggcctcgcagccggtcacgatgcgctggttcccggtcgatgcggccggcgcgccggtg
gccgccacgcccgccgacgccggcctcggtgaggtcgacacgggccgcacatacgtggtg
ccctggccgggcgcggccgtcagccccgggggcgtctcggtcgactggccggggtggcga
ccgctgcaggaatcggactacgggtccgacgaagagctgctgcccggatcgaacgtctgg
aacggcctgatcgaggacgacggcgaggccgatcacccgtggcgcgagcggaccgcgatc
gtcttcgcggtgaaccccgagctcaccatcaccgcgacctacccgccggcggatcccgac
tgcgcggtgccgatggagacggagctcgtcgtcgagaagaccgcgagcacgccgatcgtc
gagccgggcgacgacttccggtacgagatcgcgctgcgcaacgtgcacgaccacggcgcc
gcgggcggcgtcgtcctcaccgacgagatccccgacgacatcgcggtgaccgccatctcc
acctcggcgacggcgttcccgcgctggaccggctgcgcggtcgccggcgccgatcccgcc
ggctacggcggcacgctcacgtgcgagctgttcggtccgctggcggccggccagcaggcg
ccgtccgtcacgctggacgcgacgctgcgggcgacgaccccggacatcgaattcgtcaac
gtcgccgtggtcgactaccacgcgttcaacgaccccggcgacgtcggtcgcacgaccgac
gacgcgatcgtgcgcaccgagcacctcgacgacgtcggcatcgacaagtccaacgcgctc
ggcccggacggctccgtcgaggcgggcgacgtgttcgactacacgatcaccgtcaccaat
cacggcacccggaccgcgacgggggtcgtggtgaccgacgagctgcccgaccggctgcgg
ccggtcgccgtgaccctgcccgacggctggatcaacgacgcgcccggcgggctcctcacc
gacggcgtcctgaccgtccgcaccggcgagctcgccgtcggcgccagcgccgtcatcgtg
ctcaccgtcgaggtgctgccggtggaggtgcaggtcggctccgatacgggcacgatcgac
gagctgccgtcgcccctgctgccgctggacgacgcggtgatccgcaacgaggcggtcgtc
tcggccgatgcggacgacgatccgagcaacaaccgcgacgacgacgaggtgcccacgcgc
gacatcacgacgatggcgctggtccgctgcgtcgccgacgcgccgtacctgatcttcagc
gtgaacacgacgccgaacgtcaccggtccgatttcgatgaactgggtgccgctcgacgcc
gagggcgagccggtgccgaccgcgacgccggccgacgccggcctcgacgaggtgcagcgc
ggcgaggtgtacgtgctgccgtggccgggcgcggagttcagccagggcggcgcggcgatc
gactggccgggatggcggccgctgaccgccgacgacctcgacgccgacgggcaaccgctg
ccggggctgaacgtcttcaacggcctcgtcgaggatgtctccgagggcgactacgcctgg
cgcgggcagacgagggtgacgttccaggtgaaccccgagacgacgttcaccgccggctac
ccgccggccacgcccgagtgcgtcgttccgatggcgaccgagctcgacatcgagaagacc
gcgagcgtcgacgtggtcgcgggcggcaccgcgttcgactacacgatcgaggtcaccaac
gtccacgactacggcgcggccgccgggatcgtcctcaccgacgagatccccgacaccatc
cgcgtgacggacgtcgatgcgggcgccgccgacgccttcccccgctgggaggactgtgcc
gtcacgggcgccgacgcccgcggatacgggggcgagctgcgctgcgagctgttcggcccg
ctgcgcgccgggcaggcggcgccgaccgtcacgctgagcgcgcgcgtggcacccgacgtc
ggcgccgagacgatcacgaacgtcgcggtcgtcgactaccacacggccgacgatcccacc
gatgtcggccgcgccgtcgacgacgccgtggtgcgcacgcagctggccgtgaccggcggg
accatcgcgtggggcgccggcgcgttcgggctgctggccgcggccgcgggcctgctgctc
gtgcgacgccgcggtcgggtccgcgccgacggctga
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