Microbacterium sediminis: E3O41_08220
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Entry
E3O41_08220 CDS
T06576
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
msed
Microbacterium sediminis
Pathway
msed00750
Vitamin B6 metabolism
msed01100
Metabolic pathways
msed01240
Biosynthesis of cofactors
Module
msed_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
E3O41_08220 (pdxS)
Enzymes [BR:
msed01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
E3O41_08220 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
NanE
IGPS
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
QBR74390
LinkDB
All DBs
Position
complement(1727095..1728006)
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AA seq
303 aa
AA seq
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MPNEAAPAIAPSTGTARVKRGLAEMLKGGVIMDVVTADQAKIAEDAGAVAVMALERVPAD
IRAQGGVARMSDPDLIDGIIEAVSIPVMAKARIGHLVEAQVLQELGVDYIDESEVLSPAD
YANHIDKWPFTAPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEATRHIRQITGEI
RALAAKSDDELYVAAKELQAPYELVAEVARTGSLPVVLFTAGGVATPADAAMMMQLGADG
VFVGSGIFKSGDPAARAAAIVKATTFYDDPSVIAEVSRGLGEAMVGINVADVPAPHRLSE
RGW
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgaagcagcccccgctatcgccccgtccaccggaaccgcgcgcgtcaagcgc
ggccttgccgagatgctcaagggcggcgtcatcatggatgtcgtcacggccgaccaggcg
aagatcgccgaggacgccggagcggtcgccgtcatggcactcgagcgcgtgcccgccgac
atccgcgcccagggcggggtcgcccgcatgagcgacccggacctcatcgacgggatcatc
gaggccgtctcgatccccgtcatggcgaaggcgcgcatcggccacctcgtcgaggcgcag
gtgctgcaggagctcggcgtcgactacatcgacgagtccgaggtgctctcgccggcggat
tacgcgaaccacatcgacaagtggcccttcacggccccgttcgtgtgcggggcgaccaac
ctgggcgaggcgctgcgccggatcaccgagggcgccgcgatgatccgctccaagggcgag
gccggcacgggagacgtgtccgaggcgacccggcacatccgccagatcacgggcgagatc
cgggcgctggcggccaagagcgacgacgagctgtacgtcgcggccaaggagctgcaggcg
ccctacgagctcgtcgccgaggtcgcgcgcacgggttcgctgccggtggtgctgttcacg
gccgggggagtggcgacccccgccgacgcggcgatgatgatgcagctgggcgccgacggc
gtcttcgtgggatcggggatcttcaagtcgggcgatccggccgcgcgcgcggcggcgatc
gtgaaggcgacgaccttctacgacgatccctccgtgatcgcggaggtctcgcgcgggctg
ggtgaggcgatggtggggatcaacgtcgccgacgtgcccgcgccgcatcgcctgtccgag
cgcggatggtga
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