Microbacterium sediminis: E3O41_08420
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Entry
E3O41_08420 CDS
T06576
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msed
Microbacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msed03032
]
E3O41_08420
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_08420
Enzymes [BR:
msed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E3O41_08420
DNA replication proteins [BR:
msed03032
]
Prokaryotic type
DNA Topoisomerases
E3O41_08420
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E3O41_08420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
Inp1
Motif
Other DBs
NCBI-ProteinID:
QBR75466
LinkDB
All DBs
Position
1764853..1767231
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AA seq
792 aa
AA seq
DB search
MQGSYLEYAYSVIYSRALPDARDGLKPVQRRILYQMAEMGLRPDRGHVKSARVVGEVMGK
LHPHGDSAIYDALVRLAQDFALRVPLVDGHGNFGSLDDGPAAARYTEARLASPALALTED
LDEDVVDFVPNYDGQFQQPDVLPAAYPNLLVNGASGIAVGMATNMAPHNLIEVVNAAIHL
LENPEATTDELMEFVPGPDFPSGGIVMGLDGVKDAYETGRGAIKVRAKTSIEQIGPRRTG
IVVTELPYMVGPERVIEKMKDAVQSKKLQGVAEVQDLTDRNNGLRLIITVKTGFDPAAVL
ELLFRLTPMEDSFNFNNVALVDGQPRTLGLKELLRVYIDHRLQVVTRRSRYRLARRQERL
HLVQGLLIAILDIDEVIQVIRSSETAEEARTRLCQVFDLDEVQAEYILELRLRRLTKFSR
IELEKERDELLAEIAYLEELLGSDALLRRQVATELEATAEKLGTPRRTMLMNARPAAPRS
AKASAGTDLQIADGPTLVALSTTGRAVRVDLTEGQELAAPSRRSKHDAILATAQGTIRGE
LGAITSRGRIMRFSPIDLPSVPASSVQLGAGVKLRDYIGLLDKSERIVTIIALDSDVPVA
LGTAQGVVKRIVPSGLAAKPELEVIGLKPGDAVVGAAVAPGDAELVFVTKDAQLLRFAAS
SVRPQGAPAGGMAGIKLGAGSEVLFFGAATGDDTVVVTVSGSDAILAGTDPGRAKITDFS
EFPAKGRATGGVRAHSLLKGEDRLTLAWVGPDPALAVDAQGAVRKLPQTLARRDASGQPL
EAVIGSIGRTLV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctcgtaccttgagtacgcatactccgtcatctactctcgcgccctgcccgat
gcccgcgacggcctcaagcccgtgcagcgccgcatcctctaccagatggccgagatgggg
ctgcgccccgaccgcggccacgtcaagagcgcccgcgtcgtcggcgaggtgatgggaaag
ctgcaccctcacggcgacagcgcgatctacgacgccctcgtccgcctcgcgcaggacttc
gcgctgcgcgtgccgctcgtcgacgggcacggcaacttcggatcgctcgacgacggcccc
gccgccgcgcgctacaccgaggcccgcctggcctcgcccgcgctcgcgctgaccgaggac
ctcgacgaggacgtcgtcgacttcgtccccaattacgacggccagttccagcagcccgac
gtgctgcccgccgcctacccgaacctgctcgtcaacggcgccagcggcatcgcggtcggc
atggccaccaacatggccccgcacaacctcatcgaggtcgtgaacgcggcgatccacctg
ctcgagaatcccgaggccaccaccgacgagctcatggagttcgttccgggccccgacttc
ccgtccgggggcatcgtgatgggcctcgacggcgtgaaggacgcgtacgagaccggccgc
ggcgccatcaaggtgcgcgcgaagacgtcgatcgagcagatcggtccccgccgcaccggc
atcgtcgtcaccgagctgccctacatggtcggccccgagcgcgtcatcgagaagatgaag
gacgcggtgcagtccaagaagctgcagggcgtcgccgaggtgcaggacctcaccgatcgc
aacaacggcctgcggctgatcatcacggtcaagaccggcttcgacccggccgccgtgctc
gagctcctcttccggctcacgcccatggaggactccttcaacttcaacaatgtcgccctc
gtcgacggccagccgcgcacgctcggcctcaaggagctgctgcgcgtctacatcgatcac
cgcctccaggtggtcacccggcgcagccggtaccgcctggcgcgccggcaggagcgcctg
cacctcgtgcagggtctgctcatcgcgatcctcgacatcgacgaggtcatccaggtcatc
cgctccagcgagacggccgaggaggcgcgcacgcgcctgtgccaggtgttcgacctcgac
gaggtgcaggccgagtacatcctcgagctgcgcctgcgccgcctgaccaagttctcgcgc
atcgagctcgagaaggagcgcgacgagctgctcgccgagatcgcgtacctcgaggagctg
ctcggctccgacgcgctgctgcgccggcaggtggccaccgagctcgaggccacggccgag
aagctgggcacgccgcgccgcacgatgctcatgaacgcccggccggccgcgccgcgatcg
gccaaggcctcggcgggcaccgatctgcagatcgccgacggccccacgctcgtggcgctg
tccacgacgggccgcgccgtgcgcgtcgacctcacggagggccaggagctggccgcgccg
tcgcgccgcagcaagcacgacgcgatcctcgccaccgcccagggcacgatccgcggcgag
ctcggggcgatcacctcgcgcggccgcatcatgcgcttctcccccatcgatctgccgtcc
gtgccggccagctccgtgcagctgggcgccggcgtcaagctgcgcgactacatcgggctg
ctcgacaaatcggagcggatcgtcacgatcatcgccctcgactccgacgtgcccgtcgcg
ctcggcaccgcgcagggcgtcgtcaagcggatcgtgccctcgggcctggccgccaagccc
gagctcgaggtgatcggcctcaagcccggcgacgcggtcgtcggagcggccgtcgccccc
ggtgacgccgagctcgtcttcgtcaccaaggatgcgcagctgctgcggttcgcggcgtcg
tccgtgcgaccccagggcgcgcctgcgggcggcatggccggcatcaagctgggcgccggc
agcgaggtgctgttcttcggcgcggccacgggcgatgacaccgtcgtggtgacggtgtcg
ggctccgacgcgatcctcgcggggaccgacccggggcgcgcgaagatcacggacttctcg
gagttccccgccaagggccgcgccaccggcggcgtccgcgcccacagtctgctcaagggc
gaggaccgcctcacgctcgcctgggtcggacccgacccggcgctcgccgtcgacgcccag
ggcgcggtgcgcaagctgccgcagactctcgcgcgccgcgatgcctcgggccagcccctc
gaggccgtcatcggctcgatcggccgcacgctcgtctga
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