Microbacterium sediminis: E3O41_08465
Help
Entry
E3O41_08465 CDS
T06576
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
msed
Microbacterium sediminis
Pathway
msed02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E3O41_08465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msed03021
]
E3O41_08465
Transcription machinery [BR:
msed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3O41_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
QBR74428
LinkDB
All DBs
Position
complement(1775917..1777242)
Genome browser
AA seq
441 aa
AA seq
DB search
MTTATKTPRKSATKTTAKASDETVEETTEAADAPKKAPAKRATKTAAAKTAAKAPAKKTT
AKKKADADDPEDIEPDEEIVDEAPVTEAIEVVADAEGETEEEEAAPKPATEPLPTGAIVI
SQADEEEVPVYSTQITGATADPVKDYLKQIGKVPLLNAAEEVDLAMRIEAGLFAEEKLSK
MSAAEKSSQLGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLG
LIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQML
QDLGREPTPEELSKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVP
ADAVGFTMLQRQLESLLDSLSEREAGVIRMRFGLGDGQPKTLDQIGDTFGVTRERIRQIE
SKTMAKLRHPSRSQSLRDYLE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactgccacgaagaccccgcgcaagagcgcgacgaagaccacggcgaaggcgagc
gacgagaccgtcgaggagacgaccgaggccgccgacgccccgaagaaggcgcccgccaag
cgcgccaccaagaccgccgccgcgaagaccgcggcgaaggctccggccaagaagaccacg
gccaagaagaaggccgacgccgacgatcccgaggacatcgagcccgacgaggagatcgtc
gacgaggccccggtgaccgaggccatcgaggtcgtcgccgatgccgagggcgagaccgag
gaagaggaggccgcgccgaagccggcgaccgagcccctgccgaccggcgccatcgtcatc
tcgcaggccgacgaggaggaggtgccggtctattcgacgcagatcaccggcgccaccgcc
gacccggtcaaggactacctcaagcagatcggcaaggttccgctgctgaacgcggcggag
gaggtcgacctcgccatgcgcatcgaggccggtctgttcgccgaggagaagctgtcgaag
atgtcggcggccgagaagtcgagccagctcggcctcgacctgcagtgggtggcccgcgac
ggccagcgcgccaagagtcacctgctcggcgccaacctgcgactcgtcgtctcgctcgcc
aagcgctacacgggccgcggcatgcagttcctggacctgatccaggagggcaacctcggt
ctcatccgcgcggtcgagaagttcgactacaccaagggcttcaagttctcgacgtacgcg
acctggtggatccgccaggcgatcacgcgcgccatggccgaccaggctcgcacgatccgc
atccccgtgcacatggtcgaggtcatcaacaagctcgcccgcgtgcagcgccagatgctg
caggacctgggtcgcgaacccacccccgaggagctgtcgaaggaactcgacatgaccccg
gagaaggtcatcgaggtgcagaagtacggccgcgagccgatctcgctgcacaccccgctc
ggcgaggacggcgacagcgagttcggtgacctgatcgaggacaccgaggcggtcgtgccg
gccgacgcggtcggcttcacgatgctgcagcgtcagctcgagagcctgctcgactcgctc
tccgagcgcgaggcgggcgtgatccgcatgcgcttcggcctcggcgacggccagcccaag
accctcgaccagatcggcgacacgttcggcgtcacgcgcgagcgcatccgccagatcgag
tcgaagacgatggcgaagctgcgccacccgagccgctcgcagtcgctgcgggactacctc
gagtga
DBGET
integrated database retrieval system
