Microbacterium sediminis: E3O41_08655
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Entry
E3O41_08655 CDS
T06576
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msed
Microbacterium sediminis
Pathway
msed03030
DNA replication
msed03430
Mismatch repair
msed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3O41_08655
03430 Mismatch repair
E3O41_08655
03440 Homologous recombination
E3O41_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msed03032
]
E3O41_08655
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_08655
Enzymes [BR:
msed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3O41_08655
DNA replication proteins [BR:
msed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3O41_08655
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3O41_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QBR74458
LinkDB
All DBs
Position
1818175..1819032
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AA seq
285 aa
AA seq
DB search
MTDRWPDPPPLFDLDELDAPAAADPEPVVVETAVTVVTATVAPAPVADETAMGRAERSTR
LLDRVAVFDLETTGVDVENDRIVTAYVGLLDASGEVIHAESWLADPGIEIPEGATAVHGI
TTETARAEGRPAAEVVGEIVSALRTILAGGIPVVAYNASFDLSMLKHEAQRHGIDPIVDP
SPVIDPLVIDKTVDRYRKGKRTLDVVAAHYAVALDAAHEASADAIAAGRVALAIAERYAD
ALPDTVEELHTRQIGWARAQAESLTEYFVRIGRIDAVVDGSWPIR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgctggcccgacccgccgccgctgttcgacctcgacgaactcgacgcgccg
gccgcggcggatccggagccggtcgtggtcgagacggccgtgaccgtggtcaccgcgacg
gtcgcgcctgcgccggtcgccgacgagaccgcgatggggcgggccgagcgctcgacgcgc
ctgctcgaccgcgtggcggtgttcgacctcgagaccacgggcgtcgacgtcgagaacgac
cggatcgtgaccgcgtacgtgggcctgctcgatgcctcgggcgaggtcatccacgccgag
tcgtggctggccgaccccggcatcgagatccccgagggcgccacggcggtgcacggcatc
accaccgagaccgcgcgcgccgaggggcgccccgccgccgaggtggtgggcgagatcgtc
tcggcgctgcgcacgatcctcgcgggcggcatccccgtggtcgcctacaacgcgtcgttc
gacctgtcgatgctcaagcacgaggcgcagcggcatgggatcgacccgatcgtcgacccg
agcccggtgatcgacccgctcgtcatcgacaagaccgtcgaccgataccgcaagggcaag
cgcaccctcgatgtcgtcgcggcccactacgccgtggcgctcgacgccgcgcacgaggcc
tccgccgacgcgatcgccgccggccgcgtggccctggcgatcgccgagcgctacgccgac
gcgctgcccgacacggtcgaggagctgcacacccggcagatcggctgggcgcgcgcccag
gccgagagcctcacggagtacttcgtgcggatcggccgcatcgacgccgtcgtcgacggc
agctggcccatccgctga
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