Microbacterium sediminis: E3O41_09045
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Entry
E3O41_09045 CDS
T06576
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msed
Microbacterium sediminis
Pathway
msed00061
Fatty acid biosynthesis
msed00071
Fatty acid degradation
msed01100
Metabolic pathways
msed01212
Fatty acid metabolism
msed02024
Quorum sensing
msed04146
Peroxisome
Module
msed_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E3O41_09045
00071 Fatty acid degradation
E3O41_09045
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E3O41_09045
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3O41_09045
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msed01004
]
E3O41_09045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msed04147
]
E3O41_09045
Enzymes [BR:
msed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E3O41_09045
Lipid biosynthesis proteins [BR:
msed01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E3O41_09045
Exosome [BR:
msed04147
]
Exosomal proteins
Exosomal proteins of breast milk
E3O41_09045
Exosomal proteins of breast cancer cells
E3O41_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBR74521
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All DBs
Position
1897937..1899763
Genome browser
AA seq
608 aa
AA seq
DB search
MNETSVPAIVPADPEANIGDLLAIRAQETPDRAIFSVPDGDGWRDITARQFETQVIALAK
GFVAAGVEPGDKIGFIARTTYEWTLVDFALFYAGAVMVPVYETSSPAQLQWILSDSGAVA
LIAEHEGHIASYEQVKDELPLIGKVWRLDEGAIAALTAEGAGVADGEILRRRTLARGEDL
ATIIYTSGSTGRPKGCVLTHSNFVELSRNAAKSLEVALREGTSTVLFITTAHVFARFMSI
LYIHAGVRTGHEPNTKNLVKTLGSFKPTLLLAVPRVFEKVYNSAEAKTEAEGKGRIFRAA
AAVAVEHSRRLQEGEKIGLGLKLKFALFDKLVYSKLRELMGGNVEYAVSGSAPLGPRLGY
FFRGLGVKILEGYGLTETTAPASVNLPTDIQVGTVGPALPGVDIRIADDGEVQVRGINVF
KEYWKNPEATRAAFDDGWFRTGDLGSLDEHGYLTITGRKKEIIVTAGGKNVAPAVLEDPI
RANPIVGQVVVVGDQRPFISALITLDPEMLPAWLKTHGENESLTLEQAAKSPVVRAEIQR
QIDHANTLVSRAESIRKFTILGTEWTEATGHLTPKLSIKRAEILRDFSREIEDIYATSGD
TTTNVSIG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagacatccgttcccgcgatcgtccccgccgaccctgaggcgaacatcggcgat
ctgctggccatccgcgcgcaggagacccctgatcgcgcgatcttcagcgtccccgacggc
gacggctggcgcgacatcaccgcacgccagttcgagacccaggtgatcgcgctggcgaag
ggcttcgtcgcggccggcgtcgagccgggcgacaagatcggcttcatcgcccgcacgaca
tacgagtggaccctcgtcgacttcgcgctgttctacgcgggtgccgtgatggtgccggtg
tacgagaccagctcccccgcgcagctgcagtggatcctctccgactcgggggccgtcgcg
ctgatcgccgagcacgagggtcacatcgcgagctacgagcaggtcaaggacgagctgccg
ctcatcggcaaggtctggcgcctcgacgagggcgcgatcgccgcgctcaccgccgagggt
gcgggcgtggccgacggcgagatcctccgccgccgcacgctggcccgcggcgaggacctc
gcgacgatcatctacacgtccggctccaccgggcgccccaagggctgcgtgctcacccac
agcaacttcgtggagctgtcgcgcaacgccgccaagtcgctcgaggtggcgctgcgcgag
ggcacgtcgacggtgctgttcatcacgacggcccacgtgttcgcccgcttcatgtcgatc
ctctacatccacgccggcgtgcgcaccggccacgagcccaacacgaagaacctcgtcaag
acgctcgggtcgttcaagccgacgctgctgctggccgtgccgcgcgtgttcgagaaggtc
tacaactccgccgaggccaagaccgaggccgagggcaagggccggatcttccgcgcggcc
gccgccgtggccgtcgagcactcgcgccgcctgcaggagggcgagaagatcggcctgggt
ctgaagctcaagttcgccctgttcgacaagctcgtctactcgaagctgcgcgagctgatg
ggcggcaatgtcgagtacgccgtgtccggatcggcaccgctgggcccgcgcctgggctac
ttcttccgcggcctcggtgtgaagatcctcgagggctacggcctcaccgagaccacggcg
ccggcgtcggtgaacctgcccaccgacatccaggtcggcacggtcgggcccgcgctgccg
ggcgtcgacatccgcatcgccgacgacggcgaggtgcaggtgcgcggcatcaacgtgttc
aaggagtactggaagaacccggaggcgacccgggccgccttcgacgacggctggttccgc
accggcgatctcgggtcgctcgacgagcatggctacctcacgatcaccgggcgcaagaag
gagatcatcgtcacggccggcggcaagaacgtcgcccccgccgtgctcgaggacccgatc
cgcgccaacccgatcgtcggtcaggtggtggtcgtgggcgaccagcgcccgttcatctcg
gcgctcatcacgctcgacccggagatgctgcccgcttggctcaagacccacggcgagaac
gagagcctcacgctcgagcaggcggccaagagccccgtcgtgcgggccgagatccagcgg
cagatcgaccacgcgaacacgctcgtctcgcgcgccgagtcgatccggaagttcacgatc
ctcggcaccgaatggaccgaggccaccggccacctcacgccgaagctgtcgatcaagcgc
gccgagatcctgcgcgacttcagccgcgagatcgaggacatctacgccaccagcggcgac
acgacgacgaacgtctcgatcggctga
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