Microbacterium sediminis: E3O41_09080
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Entry
E3O41_09080 CDS
T06576
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msed
Microbacterium sediminis
Pathway
msed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3O41_09080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_09080
Enzymes [BR:
msed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E3O41_09080
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E3O41_09080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBR74528
LinkDB
All DBs
Position
complement(1904203..1904847)
Genome browser
AA seq
214 aa
AA seq
DB search
MSPADEERPGAEEWVPRGATVERLRAAVDECRGCELWRDATQAVFSRGEPDARIMLVGEQ
PGDREDREGAPFVGPAGRVVDDALGAAGVPADGVYRTNAVKHFRFERRGKRRIHEKPGVA
HVVACRPWLEEEIAAVRPEVIVALGATAARAVLGRPVTIGEVRGTVMESSDPSGTPTVVT
AHPSSILRVRDETDRRAAFAQLVDDLRRAAEVTG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcggacgaggagcggcccggggccgaggagtgggtgccgcgcggcgcgacg
gttgagcgactgcgcgcggccgtggacgagtgccgcgggtgcgagctgtggcgcgatgcg
acccaggccgtcttctcgcggggtgagccggatgcgcggatcatgctcgtcggcgagcag
ccgggcgaccgcgaggaccgggagggagcgcccttcgtcggcccggccggtcgcgtggtc
gacgacgcgctcggggctgccggcgtgcccgccgacggcgtgtaccgcacgaacgcggtg
aagcacttccggttcgagcggcggggcaagcggcgcatccacgagaagcccggcgtcgcg
cacgtcgtggcgtgccggccgtggctggaggaggagatcgccgccgtgcggccggaggtg
atcgtggcgctcggggcaaccgcggcgcgggccgtgctcggcaggcccgtgacgatcggc
gaggtgcggggcacggtcatggagtcgtcggatccgtccggcaccccgaccgtcgtcacc
gcccatccctcgagcatcctgcgcgtgcgcgacgagaccgatcgccgtgccgccttcgcg
cagctcgtcgacgacctccgccgcgccgcggaggtcaccggctag
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