Microbacterium sediminis: E3O41_10975
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Entry
E3O41_10975 CDS
T06576
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msed
Microbacterium sediminis
Pathway
msed03420
Nucleotide excision repair
msed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E3O41_10975
03430 Mismatch repair
E3O41_10975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_10975
Enzymes [BR:
msed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3O41_10975
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3O41_10975
MMR (mismatch excision repair)
Other MMR factors
E3O41_10975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_22
AAA_11
AAA_16
ResIII
DEAD
PAC4
Motif
Other DBs
NCBI-ProteinID:
QBR74869
LinkDB
All DBs
Position
complement(2298864..2301263)
Genome browser
AA seq
799 aa
AA seq
DB search
MSDASSPLIVQGSGPAADPLLDGLNPQQREAVEYRGPALLIVAGAGSGKTSVLTRRIASL
LRAREAWPSQILAITFTNKAAQEMRERVEQLVGDSARGMWISTFHSACVRILRREAEQFG
FTKAFTIYDSGDSRALIKRLVKEHEADALGLTPAAVQSKISKLKNELSDSDAYARTASHD
DPAERVFIEIFRDYERQLRKANAFDFDDLIAQTVYLFRAFPQVADVYRKRFRHILVDEYQ
DTNHAQYALIHELTRPIQSSEDVGGGMLALMDEGEAASLTVVGDSDQSIYAFRGADIRNI
SEFERDFPGAKVVLLEQNYRSTQNILDAANAVISNNFDRKAKNLWTDAGRGERVVGYTGY
SQHDEAQFVADEIEALHRAGAAYGDMAVFYRTNSQSRALEEILIRSAVPYKIMGGTKFYE
RAEIKDALAYLVAVANPADEMAVRRILNKPKRGIGAVTETGIAQFAADHDITFRDALANS
AELGLGPKLQAAIAHLDAVLREASEIMLPASGEAAPPTSVTEGLQVLLNKSGYYDALRAS
RDPQDEARVENLDELVAVTREFARNNPEGTLLDFLTEVALVADSDDLDDASGSVSLMTLH
TAKGLEFDHVFLTGVEEDLIPHRISAGEPGGPQEERRLFYVGITRARKRLYLSLAMTRAQ
FGEVSVAMPSRFLQEIPAELIDWRQSPGDVNGRGGTQSRALNARRPGGSDRWGAKPLPAG
GGLKPKSTAMDRFPGLVTNKMRDNGDLELAAGDRIRHDDFGEGRVDAVTGEGAKRIAHVR
FDSAGSKKLLIKVAPIVKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgcctcctcgcccctcatcgtccagggttccggccccgccgccgatccgctt
ctcgacggcctgaacccgcagcagcgcgaggccgtcgaataccgcgggcccgccctgctc
atcgtcgcgggcgccggatcgggcaagacgagcgtgctgacccgccgcatcgcctcgctg
ctgcgcgcgcgcgaggcatggccgtcgcagatcctcgcgatcacgttcacgaacaaggcc
gcgcaggagatgcgcgagcgcgtcgagcagctcgtgggcgacagcgcccgcggcatgtgg
atctcgacgttccactcggcctgcgtgcgcatcctgcgccgcgaggccgagcagttcggc
ttcaccaaggcgttcacgatctacgactcgggcgactcgcgcgccctcatcaagcggctc
gtcaaggagcacgaggccgacgcgctggggctgacgcccgccgccgtccagtcgaagatc
tcgaagctcaagaacgagctgtccgactccgacgcgtacgcccgcacggccagccacgac
gatcccgccgagcgcgtgttcatcgagatcttccgcgactacgagcgccagctgcgcaag
gccaacgccttcgacttcgacgacctgatcgcgcagacggtctacctcttccgcgccttc
ccgcaggtggccgacgtgtaccgcaagcggttccggcacatcctcgtcgacgagtaccag
gacaccaaccacgcgcagtacgcgctcatccacgagctgacccggccgatccagtcctcc
gaggacgtcggcggcggcatgctcgcgctgatggacgagggcgaggccgcctcgctcacg
gtggtcggcgactcggatcagtcgatctacgccttccgcggcgccgacatccgcaacatc
agcgagttcgagcgcgattttcccggcgccaaggtcgtgttgctggagcagaattaccgc
tcgacgcagaacatcctcgacgccgccaacgcggtgatctcgaacaacttcgaccgcaag
gccaagaacctgtggaccgacgccggccggggcgagcgcgtcgtcgggtacaccggctac
tcgcagcacgacgaggcgcagttcgtggccgacgagatcgaggcgctgcatcgcgcgggc
gccgcctacggcgacatggcggtcttctaccggaccaactcgcagtcgcgtgcgctcgag
gagatcctgatccgctccgccgtgccctacaagatcatgggcggcaccaagttctacgag
cgggccgagatcaaggacgctctggcctacctcgtggcggtggccaaccccgccgacgag
atggcggtgcggcgcatcctcaacaagcccaagcgggggatcggcgccgtcaccgagacg
ggcatcgcccagttcgcggccgatcacgacatcacgttccgcgacgcgctcgccaactcg
gccgagctcgggctggggcccaagctgcaggccgcgatcgcgcacctggacgccgtgctg
cgggaggcgtcggagatcatgctgccggcctcgggcgaggccgcgccgccgacgtcggtg
accgagggcctgcaggtgctgctgaacaagtcgggctactacgacgcgctgcgggcctcg
cgcgatccgcaggacgaggcgcgcgtcgagaacctcgacgagctcgtggccgtcacgcgc
gagttcgcgcgcaacaaccccgaggggaccctgctcgacttcctcaccgaggtcgcgctc
gtggccgacagcgacgatctcgacgacgcgtccggatcggtgtcgctcatgacgctgcac
accgccaaggggctcgagttcgaccacgtgttcctcaccggcgtggaggaggacctcatc
ccgcaccggatctcggcgggcgagcccggcgggccgcaggaggagcgccgcctgttctac
gtgggcatcacgcgcgcccgcaagcgcctgtacctctcgctcgccatgacgcgcgcgcag
ttcggcgaggtctcggtcgccatgcccagccggttcctgcaggagatccccgccgagctg
atcgactggcgccagtcgcccggcgatgtcaacggccgcggcggcacccagtcgcgcgcg
ctcaacgcgcgccggcccggcggctccgaccgatggggcgccaagccgctgccggccggc
ggggggctcaagcccaagtcgacggccatggatcgcttccccgggctcgtcacgaacaag
atgcgcgacaacggcgacctcgagctcgccgccggcgaccgcatccgtcacgacgacttc
ggcgagggccgcgtcgatgcggtcacgggcgagggcgccaagcgcatcgcgcacgtgcgg
ttcgactccgccggatccaagaagctgctcatcaaggtcgcgccgatcgtcaagctctga
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