Microbacterium sediminis: E3O41_11375
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Entry
E3O41_11375 CDS
T06576
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
msed
Microbacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msed03016
]
E3O41_11375 (truA)
Enzymes [BR:
msed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
E3O41_11375 (truA)
Transfer RNA biogenesis [BR:
msed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E3O41_11375 (truA)
Prokaryotic type
E3O41_11375 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF4902
Motif
Other DBs
NCBI-ProteinID:
QBR75525
LinkDB
All DBs
Position
complement(2373091..2373987)
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AA seq
298 aa
AA seq
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MDPRDAGSPREPAKPAHRIRLDLAYDGSGFKGWARQPRLRTVQGTLEAALSRIAGSPVLL
VVAGRTDAGVHATGQVAHADLTEEQWARMTHRRRNEPRPADPAAAIARRATGVLGPYSDV
AIHRVSTAPAGFDARFSAAWRRYEYRIADDRSGYDPLQRHRTTRVRADLDVGAMDEAARS
LIGLHDFAAYCKPRPEATTIRTLLEFDWRRDERGVLVANVKADAFCHSMVRALVGACVAV
GEGKLRPADLEVLRDARERTSAFKVLEARGLTLTAVGYPADDQLAARAERTRNRRDLE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atcgatcctcgcgacgcgggatcccctcgcgaaccggcgaagcccgcccaccggatccgc
ctcgacctcgcctacgacgggtcggggtttaagggctgggcgcgccagccgcggctgcgc
accgtgcagggcacgctcgaggcggcgctcagccggatcgccggatcgcccgtgctgctc
gtcgtggccgggcggaccgacgcgggcgtgcacgccacgggtcaggtggcgcacgccgac
ctcaccgaggagcagtgggcgcgcatgacccaccgccgccgcaacgagccgcgccccgcc
gatcccgccgccgcgatcgcccgccgcgcgaccggcgtgctcggcccgtactcggatgtc
gcgattcaccgcgtcagcaccgcccctgcgggcttcgacgcgcgcttctcggcggcgtgg
cgccgctacgagtaccggatcgccgacgaccggtccggctacgacccgctgcagcgccac
cgcaccacccgcgtgcgcgccgacctcgacgtcggcgcgatggacgaggcggcccgcagc
ctgatcggcctgcacgacttcgccgcctactgcaagccgcggcccgaggccaccacgatc
cgcaccctgctggagttcgactggcggcgcgacgagcgcggcgtgctcgtggccaacgtc
aaggccgacgcgttctgccacagcatggtgcgcgcgctcgtgggcgcgtgcgtggcggtg
ggggagggcaagctgcggccggccgatctcgaggtgctgcgcgatgcccgcgagcgcacg
agcgcgttcaaggtgctcgaggcgcgcgggctcacgctcaccgccgtcggctaccccgcc
gacgaccagctcgcggcccgcgccgagcgcacccgcaaccgccgcgacctcgaatag
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