Microbacterium sediminis: E3O41_11430
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Entry
E3O41_11430 CDS
T06576
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msed
Microbacterium sediminis
Pathway
msed03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E3O41_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msed03021
]
E3O41_11430
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_11430
Enzymes [BR:
msed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E3O41_11430
Transcription machinery [BR:
msed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E3O41_11430
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E3O41_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QBR74942
LinkDB
All DBs
Position
complement(2383539..2384528)
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEEKISEFRSRFIIEPLEPGFGYTIGNSLRRSLLSSIPGAAVTSIRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEIHN
PELVIATLNDTAKFELELTIERGRGYVSAVQNRNEYAEAGQIPIDSIYSPVLKVAYRVDA
TRAGERTDFDKLVLDVETKPSIAPRDAVASAGRTLVELFGLARELNVEAEGIEIGPAPVE
QVLSNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LVSLGLSLKDSVPGFDGANFYGGYDDETL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtccgactctcaccgaggagaagatctcggagttccgcagccgg
ttcatcatcgagccgctggagccgggcttcggttacacgatcggcaactcgctgcgtcgc
agcctcctctcgtcgatcccgggtgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcagcacgatccccggtgtcaaggaagatgtcaccgagatcatcctcaacatc
aagcagctcgtggtgtcgagcgagcgcgacgagcccatcacggcttacctgcgcaagacc
ggcgccggcgaggtcacggctgccgacatctcggctcccgcgggcgtcgagatccacaac
cccgagctggtcatcgccacgctgaacgacaccgccaagttcgagctcgagctcacgatc
gagcgcggtcgcggctacgtctcggccgtgcagaaccgcaacgagtacgccgaggccggt
cagatcccgatcgactcgatctactcgccggtgctcaaggtcgcctaccgcgtggacgcc
acgcgtgccggtgagcgcaccgacttcgacaagctcgtgctggacgtcgagaccaagccg
tcgatcgccccgcgcgacgcggtggcctcggccggccgcacgctcgtcgagctgttcggc
ctcgcccgcgagctgaacgtcgaggccgagggcatcgagatcggccccgcgccggttgag
caggtgctctcgaacgagctgtcgatgccgatcgaggacctcgacctgtcggtccgttcg
tacaactgcctcaagcgcgagggcatcaacacggtgagcgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggtcagaagtcggtcgacgaggtgcgcgacaag
ctcgtctcgctcggtctgtcgctgaaggactcggtgcccggtttcgacggcgccaacttc
tacggcggctacgacgacgagaccctctga
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