Microbacterium sediminis: E3O41_12165
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Entry
E3O41_12165 CDS
T06576
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
msed
Microbacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_12165 (radA)
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3O41_12165 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
AAA_22
ChlI
AAA
AAA_16
Lon_C
AAA_30
nSTAND3
AAA_14
NTPase_1
AAA_5
DAP3
AAA_18
IstB_IS21
RecA
NACHT
CbiA
ABC_tran
AAA_19
DUF6187
AAA_29
ATPase_2
AAA_24
KdpD
SLFN-g3_helicase
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QBR75074
LinkDB
All DBs
Position
2535743..2537098
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AA seq
451 aa
AA seq
DB search
MASKRPAPAAFRCTECGWTAAKWVGRCGECQQWGTVVEAAQPQGITRRVESMIPTAAAMP
ITRVETKDAPRRPSGIGEFDRVLGGGVVPGAAILLSGEPGVGKSTLLLEVAARAAVEGRR
VLYVSAEESPAQVRLRAERTGALHDELFLASETDLATILGHIDSVQPELVIVDSVQTVSS
SLSEGAAGMPGQVREVASTLIRVAKERDLPIILVGHVTKDGQVAGPRLLEHLVDVVCQFE
GDRQTALRFVRALKNRFGPTDEVGCFEMTGDGIAEVPDPSGLFLSQGSPEPGTCVAIALE
GRRALPVEVQALTIPTSAPNPRRVVHGVDSSRVAMVLAILERRAGIKTSDQDVYVSTVGG
VRFTEPAADLAIAVAVAGSVLGFKVAREVAAVGELSLAGEVRPVTQAAQRRTEAARLGYR
HVVDDGAKRLRAALEQIRAHAPRTLDDVPAF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaaacgacccgcccccgccgccttccgctgcacggagtgcggctggacggcc
gccaagtgggtgggccgctgcggcgagtgccagcagtggggcacggtcgtcgaggcggcg
cagccgcaggggatcactcgccgcgtcgagtcgatgatccccacggccgccgcgatgccg
atcacccgcgtcgagaccaaggacgccccgcgccggcccagcggcatcggcgagttcgat
cgggtgctcggcggcggcgtcgtgcccggcgcggcgatcctgctgtccggcgaacccggc
gtgggcaagtcgacgctgctgctcgaggtcgccgcccgcgccgcggtcgaggggcgccgc
gtgctctacgtcagcgccgaggagtccccggcacaggtgcgactgcgggccgagcgcacc
ggcgcgctccacgatgagctcttcctcgccagcgagacggatctcgccaccatcctcggt
cacatcgactccgtgcagccggagctcgtgatcgtcgactccgtgcagaccgtgtcgtcg
tcgctgtcggagggcgcggccggcatgccggggcaggtgcgcgaggtcgcctccacgctc
atccgcgtggccaaggagcgcgatctgccgatcatcctcgtcgggcacgtcacgaaggac
ggccaggtggccggcccccggctgctcgagcacctcgtcgacgtcgtgtgccagttcgag
ggcgatcggcagaccgccctgcgcttcgtccgtgcgctgaagaaccggttcggcccgacc
gacgaggtcggctgcttcgagatgaccggcgacggcatcgcggaggtgcccgatccgagc
gggctgttcctctcgcagggttcccccgagcccggcacgtgcgtcgccatcgccctcgag
ggccgccgcgcgctcccggtcgaggtgcaggcgctcaccatcccgacgagcgccccgaac
ccgcggcgcgtggtgcacggcgtcgactcctcgcgcgtggccatggtgctggcgatcctc
gagcgacgggcgggcatcaagacgagcgatcaggacgtgtacgtctccaccgtgggcggg
gtgcggttcaccgagccggcggccgatctggcgatcgcggttgccgtggccgggtcggtg
ctgggcttcaaggtcgcgcgcgaggtcgcggccgtcggcgagctcagcctcgcgggtgag
gtgcggcccgtgacccaggcggcgcagcggcgcaccgaggccgcgcgcctgggctatcgg
cacgtggttgacgacggcgccaagcgcctgcgcgccgcgctcgagcagatccgcgcccac
gcgccgcggaccctcgacgacgtgcccgcgttctga
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