KEGG   Metabacillus sediminis: WCV65_01590
Entry
WCV65_01590       CDS       T10864                                 
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
  KO
K03090  RNA polymerase sigma-B factor
Organism
msee  Metabacillus sediminis
Brite
KEGG Orthology (KO) [BR:msee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msee03021]
    WCV65_01590 (sigB)
Transcription machinery [BR:msee03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WCV65_01590 (sigB)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 KORA GerE HTH_23 TnsD HTH_3 DUF134 DUF1492 HTH_28 IF2_N DUF6761 NirdL-like_HTH HTH_16 PhyR_sigma-like Sigma70_ECF
Other DBs
NCBI-ProteinID: WXB97239
UniProt: A0ABZ2NHH3
LinkDB
Position
276720..277511
AA seq 263 aa
MTQPSQTTKLTKEQVNELITAYQETQDDQAQTDLVHHYRGLVETLAKKYSRGKSFHEDLL
QVGMIGLLGAIRRYDSEVGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKA
AVDELTNTLQRSPKVYEIAEYLEVSEEEVLETMEMGKSYQALSVDHSIEADPDGSTVTIL
DIVGSQDDGFERVNQRMMLESVLHVLSEREKQIIQLTFIENKSQKEAGEELGISQMHVSR
LQRRAIHKLKEALAADKSVEYYQ
NT seq 792 nt   +upstreamnt  +downstreamnt
atgacacaaccgtcacaaactacgaagctaactaaagaacaagtaaatgaactaataacc
gcttaccaggagacacaggatgatcaggctcaaacggatttagtccatcactatagaggt
cttgttgaaacccttgccaagaaatactcccgtgggaaaagctttcatgaagacctgctt
caggtaggaatgatcggccttttaggtgcgattaggaggtacgattctgaagttgggaaa
tcgtttgaagcttttgcaattccaacgataatcggcgaaatcaaaagatttctccgcgat
aagacatggagcgtccatgtaccgcgaagaatcaaagaactcggaccgaagattaaggcc
gctgtggatgaactgacaaatactcttcagcgttcgccgaaagtgtatgaaattgctgaa
taccttgaagtgtcagaggaagaagtgctcgaaacgatggaaatgggaaaaagctatcag
gctttatctgttgaccactcgattgaagcagatcctgacggcagcacggttaccattctt
gatatcgttggttctcaggatgatggattcgaacgggttaaccagcgtatgatgcttgaa
agtgtgctccatgttctttctgagcgggaaaagcaaattattcagctgacgtttattgaa
aacaaaagccagaaggaagccggagaggaattaggtatttctcaaatgcatgtttcaagg
cttcagcgcagagctattcataagctgaaagaagctctggcagctgataaatctgtggag
tactatcaatga

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