Metabacillus sediminis: WCV65_06035
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Entry
WCV65_06035 CDS
T10864
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
msee Metabacillus sediminis
Brite
KEGG Orthology (KO) [BR:
msee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msee03019
]
WCV65_06035 (yhaM)
Messenger RNA biogenesis [BR:
msee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WCV65_06035 (yhaM)
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Coat_F
Motif
Other DBs
NCBI-ProteinID:
WXB98035
UniProt:
A0ABZ2NK89
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All DBs
Position
1130851..1131795
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AA seq
314 aa
AA seq
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MSKGVMHFDVGEQVELYLLIKSSTKGVASNGKPFLTLILQDQSGEIEAKLWDASQGDEQI
YGPQGIVKIAGDIHHYRGRNQLKIKNIRPLHDHETFDISDFLETAPLKKEDMMDTITQYI
FEMKNPNVQRITRHLVKQHQQAFLEYPAATKNHHEFVSGLAYHVVSMLNLAKSIAALYPS
LDTDLLYAGVILHDLGKVTELSGPISTTYTVEGNLLGHISIMVNEIAQAAKELGIESEEV
VVLQHLILSHHGKAEWGSPKPPMIKEAEILHYIDNLDAKMNMLDRALERVKPGEFSERVF
ALENRSFYKPVFHN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggagttatgcattttgatgtaggggagcaggttgagctttatctgctcatt
aaatcatccaccaagggggtagcaagcaacgggaaaccctttttgaccctcatcctccag
gatcaaagcggagaaatcgaagcgaagctctgggatgcaagccagggggacgaacaaatt
tatggacctcaaggcattgttaagattgccggggatatccatcattacagaggaagaaac
cagctcaaaataaaaaacatccgaccgcttcatgaccatgaaacgtttgatatttcggac
tttctggaaacagcacctttgaaaaaagaagacatgatggataccatcactcaatatatt
tttgaaatgaaaaatccaaatgtccagcgcatcacaaggcacctagtgaaacagcatcag
caggcttttcttgaatacccggctgccacgaaaaatcaccatgaattcgtttctggactt
gcataccatgttgtatccatgctgaatctggcaaaatcgattgcagcactttatccgtct
cttgatacggatctgctctatgcgggtgtaatcctgcatgaccttggaaaagtaacagag
ctaagcggcccgatcagtacaacttatacggtagaaggcaacctgcttggccacatatcc
attatggtgaatgaaattgcgcaggcagcaaaagaattgggaatagaatctgaagaagtc
gtcgtcttgcagcatcttattctttcccatcatggaaaagcagagtggggaagtccgaag
ccgccaatgattaaggaagcagaaattcttcattacattgataatctcgatgctaaaatg
aatatgcttgaccgtgcactggaacgtgtaaaacccggagaattttccgaaagggtcttt
gcccttgaaaaccgctccttttacaaaccggtttttcataactag
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