Metabacillus sediminis: WCV65_06290
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Entry
WCV65_06290 CDS
T10864
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
msee Metabacillus sediminis
Brite
KEGG Orthology (KO) [BR:
msee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msee03400
]
WCV65_06290 (addB)
Enzymes [BR:
msee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCV65_06290 (addB)
DNA repair and recombination proteins [BR:
msee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
WCV65_06290 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
COG5_N
UvrD-helicase
DEAD
Motif
Other DBs
NCBI-ProteinID:
WXB98083
LinkDB
All DBs
Position
1177660..1181151
Genome browser
AA seq
1163 aa
AA seq
DB search
MTIRFMAGRSGSGKTTMILNEIREKLNEQPDGPPILFLVPDQMTFAMEYELARTPGLSGM
IRAQVFSFSRLSLRILQETSGAARQPITSTGVQMMLRKIIEDEKQNFKVYGKASDKTGFI
QHVEAMITEFKRYSINPAELLGQIQAIQKQMNEKERVLSGKLEDLHAIYERLEEALTGRY
VDAEDTLGMLSERIPESSYLEKAEIYIDGFHHFTPMEMEAVKSLLAKAARVTVSITADKL
FDRHLPHELHLFRMTGMTYTQFKKMAEDLHIETEEPVLLNELPRFIGSPSLQHLEQNYDS
RPSQPFKGLTDISICQAASHRAEIEGIARRIQEHVRKRGARFRDTAILLRHPSSYHDLIE
QVFTDYEIPFFIDQKRSMLHHPLVELIRSSLEAVTGSFRYEAMFRTIKTDLLFPAGADKR
SLREEMDLLENYVLAHGINGSRWTSEKRWIYRRFRSLEGGNAVTDEELNKEEQINRLKEL
AAKPLKELAAGLKKAKTGVQKAGALFLFLENLEIPAKLEELKQEAELAGGLIEVREHSQV
WDAVIGLLDEFAEMIGNHPISSAQFTEMMDTGLESLKFSLVPPAIDQVLIGDMERSRFYG
LKHTFVAGANDGVIPARPAEDGILSDEDRELLEQNGAAMAPSARQQLLDENFIIYMALAS
GSEHLSVSYPSADPEGKTLLPSILISRLEELFPDAVKEWFVNEPESLEEHEQLSFMPNKS
VALTYLSSQLQTWKKQYPVHDSWWDAYNYLIEHDQSGNVEMVIGSLFYKNQAKPLKQAVT
KELYGQHILGSVSRMEQFRSCPFSHFASHGLKLREREQFRLEAPDVGQLFHSALKMISDR
LGEMNVSWRDVTKDQCRSLSSEAVNRLAPMLQKEVLMSSNRHQYLKSKLEKIIARAAGVI
AEQAKASLFTPIGLELGFGKGGPLPPMRFKLDNGYTMELTGRIDRVDSAESSRGLLLRIV
DYKSSDRALNLSEVYYGIALQMLTYLDVIISYSKTWLGVEASPAGVLYFHVHDPMIQAGA
KLSLEDLEEEIFKKFKMKGLLLGEEETIQLMDQTLESGSSNIVAAGFKKSGGFSSSSSIA
SNEEFDMLRRHVRSEFKQIGTEITNGVTDISPYRMKDKVPCTFCPYKGVCQFDQSLKDND
YRVLREEKNEQIFMRLREEADNE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccggtttatggcgggacgctccggcagcggcaaaaccacaatgatcctgaac
gaaattagagaaaagctgaatgagcagccggacggtccgccgatcctttttcttgtacct
gatcagatgacatttgccatggagtatgagcttgcccgcactccgggattgagcggaatg
atccgggctcaggtatttagtttttcacggcttagcttaagaatcctccaggaaacgtca
ggcgcggcaaggcagccgattacatcaactggtgtccagatgatgctgaggaagattata
gaagatgaaaaacagaactttaaagtgtatggaaaagccagtgataagaccggttttatt
cagcatgtagaagcgatgattacggaattcaaacgatacagcataaacccggctgaactg
cttgggcagatccaagcgattcaaaaacagatgaatgaaaaggaaagagttctttcagga
aagcttgaggacttgcatgccatttatgaacggcttgaagaagcgctcacgggccggtat
gtagacgccgaggatacgctcggaatgctttcggaacgaattcccgaatcctcctatctt
gaaaaagcagagatttacatagatggttttcatcatttcacgccaatggaaatggaggcg
gtgaaaagccttctcgcaaaagcagcccgggtaaccgtcagcattacggcggataaattg
tttgacaggcatttgccgcatgagctgcatttgttccggatgacagggatgacatacacc
caattcaagaaaatggccgaggatcttcacattgaaactgaggaaccggtcttgctgaat
gagcttccaagattcatcggttctccctctcttcagcacttggagcaaaattatgattca
aggccatcacagccattcaaagggctgacggacatctccatctgccaggcggcaagccac
cgtgcggaaatagaaggaattgcccgccggattcaggagcacgtcaggaaaaggggagcc
cgtttccgggacacagcgattttactgcgccatccatccagctatcatgatttaattgaa
caggtatttacagattatgagattccttttttcatagatcaaaaacgttccatgcttcat
caccctcttgtagaattgatccggtcttccctggaggctgttacgggcagctttcgatac
gaagcgatgttccgtacgataaaaacggatctgctgtttccagcgggagcggataaacgt
tccttaagagaagagatggatctactcgaaaactatgtgcttgcacatggcataaacggg
tcaagatggacctccgaaaaaaggtggatttacagaaggttccgttccctggagggcgga
aacgcagtgacggatgaagaactgaacaaggaagaacaaatcaaccggctgaaggagctt
gctgcgaagccccttaaagaactggctgcggggctcaaaaaagcaaaaacgggagtacag
aaggcaggggctttgtttttgttccttgaaaatcttgaaattcctgcgaagctcgaagaa
cttaaacaagaggcagaattggccgggggtcttatcgaggtccgggagcattcccaagtt
tgggatgcggtgattggtctgctggatgaatttgcagaaatgatcggaaatcaccccata
tcctcggcgcagtttacggaaatgatggataccggtttggaaagcttaaagttttctctt
gttcctccggcgatagatcaggtcctgatcggggatatggaacgttcccggttttacgga
ttgaagcatacattcgtggccggtgcaaatgatggggttattccagcaagaccggcggag
gatggcatactctcggatgaggaccgcgagcttcttgaacagaacggggctgcaatggcg
ccgtcagcaagacagcagctgctggatgaaaatttcataatttatatggcgctcgcgagc
ggatcggagcacctgtctgtttcgtatccatcggcggatccggaagggaagacgctgctg
ccttctattttaattagccgtctggaggaactttttccggatgcggtgaaggagtggttt
gtaaatgaaccggaatcactcgaggagcatgaacagttatcctttatgccgaacaaatct
gttgcactgacatacttaagctctcagctgcagacgtggaagaagcaatatccggtgcat
gacagctggtgggatgcttacaattatttgattgagcacgatcagagcggcaatgtggag
atggtcatcggaagcctgttttataagaatcaggcaaagccgttgaagcaggctgtcaca
aaagagctttatggccagcatatattgggaagtgtgtccaggatggagcaattcagaagc
tgtccgttctcccattttgcgagccacggactgaagctgagggaacgcgagcagttccgt
cttgaagctccggatgtcggccagctgtttcactcggcgctcaagatgatttctgacagg
ctgggggaaatgaacgtatcctggagggatgtcacgaaggatcaatgcagatctctatcg
agtgaagcagtaaaccggctggctcccatgctccaaaaagaagtgcttatgagctcgaac
cgtcatcagtatttgaaaagcaaacttgaaaagattattgccagggcggcgggtgtgatt
gctgaacaggcaaaggcttcgctatttacgccaatcggactggaacttggcttcggcaag
ggcggcccgctgccgccaatgagatttaagctcgataacggctatacgatggagctgacg
ggtaggattgaccgggtagattcagctgaaagctccagaggccttctgcttcgaatcgtg
gattacaaatcgagcgaccgcgccctgaatctaagcgaggtttactatggtatcgctctg
caaatgctcacctatttggacgttattatttcctattccaaaacatggcttggcgtggaa
gcgagtcctgcgggcgtgctctatttccacgttcatgatccaatgattcaggccggcgca
aagcttagtcttgaggatcttgaggaagaaatctttaaaaagtttaaaatgaagggtctg
cttcttggagaagaggagacgattcagctcatggatcagacgcttgaaagcggttcgtcc
aatattgtggcagccggcttcaaaaaaagcggcggcttcagctcaagctcttcgattgcg
agcaatgaagagttcgatatgctgcggcgccatgtgagaagtgaatttaagcagattgga
acggaaattaccaatggggtgacggatatcagcccatacaggatgaaggataaagtgccg
tgcacattttgtccgtataaaggagtctgccagtttgaccaatcccttaaggacaatgat
taccgggttctgagagaagagaagaatgagcagatatttatgcgtctgagagaggaggcc
gacaatgaataa
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integrated database retrieval system
