KEGG   Metabacillus sediminis: WCV65_10370
Entry
WCV65_10370       CDS       T10864                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
msee  Metabacillus sediminis
Pathway
msee02024  Quorum sensing
msee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WCV65_10370 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    WCV65_10370 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msee03019]
    WCV65_10370 (hfq)
   03036 Chromosome and associated proteins [BR:msee03036]
    WCV65_10370 (hfq)
Messenger RNA biogenesis [BR:msee03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     WCV65_10370 (hfq)
Chromosome and associated proteins [BR:msee03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    WCV65_10370 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 DUF5608
Other DBs
NCBI-ProteinID: WXB98857
UniProt: A0ABZ2NNS0
LinkDB
Position
1981474..1981698
AA seq 74 aa
MKQAINIQDQFLNQLRKDGIFVTVFLLNGFQLRGLVKGFDNFTVLLETEGKQQLIYKHAI
STFAPQKNIQLETE
NT seq 225 nt   +upstreamnt  +downstreamnt
atgaaacaagcaatcaatattcaggaccaatttttgaaccagctgcgcaaggacggaatt
tttgtcactgttttccttcttaacggattccagctgagagggctggtaaaaggattcgat
aattttactgtactgcttgagactgaaggcaagcagcagttgatttataagcatgcaatt
tcaacgtttgcaccgcaaaagaacattcagcttgaaacggaataa

DBGET integrated database retrieval system