Metabacillus sediminis: WCV65_10370
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Entry
WCV65_10370 CDS
T10864
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
msee Metabacillus sediminis
Pathway
msee02024
Quorum sensing
msee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCV65_10370 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WCV65_10370 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msee03019
]
WCV65_10370 (hfq)
03036 Chromosome and associated proteins [BR:
msee03036
]
WCV65_10370 (hfq)
Messenger RNA biogenesis [BR:
msee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WCV65_10370 (hfq)
Chromosome and associated proteins [BR:
msee03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
WCV65_10370 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
DUF5608
Motif
Other DBs
NCBI-ProteinID:
WXB98857
UniProt:
A0ABZ2NNS0
LinkDB
All DBs
Position
1981474..1981698
Genome browser
AA seq
74 aa
AA seq
DB search
MKQAINIQDQFLNQLRKDGIFVTVFLLNGFQLRGLVKGFDNFTVLLETEGKQQLIYKHAI
STFAPQKNIQLETE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagcaatcaatattcaggaccaatttttgaaccagctgcgcaaggacggaatt
tttgtcactgttttccttcttaacggattccagctgagagggctggtaaaaggattcgat
aattttactgtactgcttgagactgaaggcaagcagcagttgatttataagcatgcaatt
tcaacgtttgcaccgcaaaagaacattcagcttgaaacggaataa
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