Metabacillus sediminis: WCV65_14085
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Entry
WCV65_14085 CDS
T10864
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msee Metabacillus sediminis
Pathway
msee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WCV65_14085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msee03400
]
WCV65_14085
Enzymes [BR:
msee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WCV65_14085
DNA repair and recombination proteins [BR:
msee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WCV65_14085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
HHH_5
AAA_22
AAA_16
nSTAND3
AAA_12
AAA
T2SSE
AAA_28
DEAD
TsaE
NTPase_1
DUF5055
NPHP3_N
UvrD_C
AAA_17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WXB99053
LinkDB
All DBs
Position
complement(2682705..2685065)
Genome browser
AA seq
786 aa
AA seq
DB search
MDELSSANHEEKPYVKAVIRAVIFHNEQNLYTVLKAKLLESNLEFDEKEITVTGYFPLLA
EEETYLFYGAVKHHPKFGMQFQTDHFRKDIPNTEEGIIQYLSSDLFKGIGKKTAEIIVGE
LGTSAISKIMQDPSVLHKIPKVNKEKADILAQTLKQHQGLEQIMISLSQFGFGPQLSMKI
YQQYQDQTLEKIQENPFQLVKDVEGIGFGKADELAHHLGISGSSPERINAACLYTIEQSS
SQEGHVYLTENQLVEKTRQLLSASNKGQVNAESISAQIAALAESKQLIADEGRIYFPILY
YSEKKVAEHIQQILEQTEYDDLFPESEFLLSLGNLEERMKVTYASSQKEAIQRALMTPML
LLTGGPGTGKTTVIRGIVELYSDLHGCSLDPGEYKKDEPFPILLVAPTGRAAKRMSESTG
MPAVTIHRLLGWNGSEGFDRNEDNPIEGKLLIIDEMSMVDIWLANQLFKSLPKQIQVVMV
GDEDQLPSVGPGQVLRDLLASKEVPTVRLTDIYRQAEGSSIIELAHHIKDGKTPSDLKTP
TSDRSFIKCASGQVKEVVRKVVENAKKKGFTARDIQVLAPMYRGPAGIDQLNILLQDIFN
PASSTKREMKFGDLVYRIGDKVLQLVNQPESNVFNGDMGEIESIFYAKENTEKEDMIVVS
FDGNEVTYTRSDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLIYTAITRSK
KFLIMCGEEEAFIRGIENRDQLERQTSLKQRLNKFTEEEDELQKLLPFDVSDANIGMENI
TPFDFM
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctttccagcgctaatcatgaggaaaagccttatgttaaagcggtcatcagg
gcggttattttccataatgaacagaatctctataccgttctgaaggcaaaattgctggag
tccaatctggaatttgatgagaaagaaatcactgtaaccggatattttcctctccttgct
gaagaagagacctaccttttttatggagccgtcaagcatcatccgaagttcggcatgcag
tttcagaccgaccacttcagaaaagatatccccaatacagaagaaggaatcattcagtac
ctgtccagcgatttgtttaaagggatcggaaaaaaaacggctgaaatcattgtgggggag
cttggaacatccgccatttcaaaaatcatgcaggatccgtctgtccttcataaaattcct
aaggtaaacaaggaaaaagccgatatccttgcccaaacgttaaagcagcaccagggtttg
gagcaaatcatgatttccctgtcccaatttggattcggtccgcagctttcgatgaaaatt
taccagcaatatcaggatcagacgcttgaaaagatccaggaaaatcccttccagcttgtg
aaagacgttgagggaataggctttggaaaagcagatgaactggcgcatcatttaggaata
tcaggcagcagtcctgaacggatcaacgccgcttgtctatataccattgaacagtccagt
tcacaggaaggacatgtctacctcaccgagaaccagctggttgagaagacaagacagctc
cttagcgcctcaaataaaggacaggtaaacgctgaaagcatttctgctcaaattgccgct
cttgctgagagcaaacagctcattgcggatgaaggaaggatctattttccaatcctttac
tactctgaaaagaaagtagccgagcacatccagcaaatcctggagcaaacggaatatgac
gacttatttccggaatctgaatttctcctttccctcggcaatctcgaggaacgaatgaag
gttacatacgcatcaagccaaaaggaagcaattcaaagagcgcttatgacaccgatgctg
ctattaacaggcggacccggtaccggcaaaacaaccgtcattcgggggattgtggaacta
tactctgacttgcacggctgctcattggatccaggcgaatataaaaaggatgagcctttt
ccgattttgctcgtcgcgcctacaggccgggctgcaaaaagaatgagcgagtcaaccgga
atgcccgccgtcaccattcacaggcttcttggctggaacggatcggagggatttgaccgc
aatgaggacaatccgattgaaggaaaacttttgatcattgatgaaatgtccatggtcgat
atctggctcgccaatcagctttttaaatcactgcctaagcagatccaggtagtcatggta
ggcgatgaagaccagcttccttctgtcggccccggtcaggttttaagggacttgcttgcc
tcgaaggaagtgccgactgtcaggctgactgatatttaccgccaggcggaaggttcatcg
atcatcgagctcgctcaccacataaaagatgggaaaaccccgtccgacttgaaaaccccg
acctcagaccgctcctttattaaatgcgcctccggccaggttaaagaggttgttcggaaa
gtggtggagaatgcgaagaaaaagggctttacggcccgggatattcaggtgctggcgcca
atgtacagaggaccggcgggaatcgaccagctcaatattctgctgcaggatatttttaat
ccggcctcaagcacgaagcgggaaatgaaattcggcgacctcgtctaccggatcggcgat
aaagtgctccagcttgtcaatcagccggaaagcaacgtttttaacggggatatgggcgaa
attgaatccatcttttacgcgaaagagaatacggaaaaagaagatatgattgtcgtttcc
tttgatggaaacgaagtcacttatacccggtccgatttttcgcaattcacccacgcctac
tgctgttcgatccataaatcgcagggaagcgagtttccaatcgtcgttttgcctgttgta
aagagctattaccgtatgctgcgcaggaatttgatttacaccgcgatcactagaagcaaa
aaattcctgatcatgtgcggggaagaagaagcctttatacgcggaattgaaaacagagat
cagcttgagcgccaaacttcattaaaacagaggctgaataaatttacagaagaagaagat
gaacttcagaagctcctgccgtttgatgtaagcgatgcgaatattggaatggaaaatata
acaccatttgattttatgtaa
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