Mycolicibacterium sediminis: MSEDJ_02740
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Entry
MSEDJ_02740 CDS
T07629
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00900
Terpenoid backbone biosynthesis
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
Module
msei_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSEDJ_02740 (ispF)
Enzymes [BR:
msei01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
MSEDJ_02740 (ispF)
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GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
BBY26178
UniProt:
A0A7I7QIR5
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All DBs
Position
complement(256388..256864)
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AA seq
158 aa
AA seq
DB search
MSFRIGQGTDVHPIEGGRQCRLLCLVFDDADGCAGHSDGDVAAHALCDALLSAAGLGDLG
TVFGTDRPEWHGVSGADMLRHVRGLLEGEGWRLGNAVVQVIGNRPKIGPRREEAQRVLSD
LLGGPVSVSATTTDGLGLTGRGEGLAAIATALVVGDDD
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttccgcatcgggcagggcactgacgtccatcccatcgagggtggacgtcagtgc
cgtctgctgtgcctcgtcttcgacgacgccgacggctgcgccggccattcggacggcgac
gtcgcagctcacgccctgtgcgacgctctgctgagcgcggcaggtctcggcgatttgggc
acggtgttcggcaccgaccggcccgagtggcacggcgtcagtggggcggacatgctccgc
cacgtccgcggtctcctcgagggcgaggggtggcgactgggcaacgccgtcgtccaggtg
atcggtaacaggccgaagatcgggccacgacgggaagaggcgcaacgcgtgctgtcggac
ctgctcggcggcccggtgtccgtgtcggcgaccacgaccgacggcctgggtctcaccggt
cgcggcgaaggtctggccgccatcgcgacggccctcgtggtcggcgatgacgattag
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