Mycolicibacterium sediminis: MSEDJ_05090
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Entry
MSEDJ_05090 CDS
T07629
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03030
DNA replication
msei03430
Mismatch repair
msei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSEDJ_05090
03430 Mismatch repair
MSEDJ_05090
03440 Homologous recombination
MSEDJ_05090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_05090
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_05090
Enzymes [BR:
msei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSEDJ_05090
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSEDJ_05090
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSEDJ_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
RNase_H_2
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
BBY26413
UniProt:
A0A7I7QJD4
LinkDB
All DBs
Position
complement(507078..508097)
Genome browser
AA seq
339 aa
AA seq
DB search
MSGRRAILEFVSIACGRPATEPGAGWAVVDVETTGFRPGQARIVSVAALAVGDDGNVEGS
FSSLLNPGVDPGPTHVHGLTSEMLAGQPTFGDVVDDLKSVLQGRTMVAHNVAFDYSFLAA
EAELIDAELPIDTVMCTVELARRLRLGSENLRLETLAAHCGVTQMRPHDALDDALVLAQI
LKPFLANAHERRTWLPVRSVSRRTWPNGHVTHEELHSLRTVAARLPCPHQNPGRFVRGRP
LVQGMRVAMSTEVSHTYDELIERILHAGLAYTDSVDQQTSLVICDRPEPDQGKGYQAGEM
GIPLVTDDDFMGLLNRVVGGRDVEPFVEPTSAGEQFTLF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgggacgccgtgccatcctcgaattcgtgagcattgcctgtggccgaccggccacc
gagcccggcgcgggatgggcggtcgtcgacgtcgagaccaccggcttccgtcccgggcag
gcgcgcatcgtgagcgtggcggcgctggcggtcggggacgacggcaacgtcgagggcagt
ttctccagcctgctcaacccgggcgtcgaccccggaccgacccacgtgcacgggttgacg
tcggagatgctggccgggcagcccacgttcggtgacgtcgtcgacgacctgaagagcgtc
ctgcagggccgcacgatggtcgcgcacaacgtcgccttcgactactccttcctcgccgcc
gaggccgagctgatcgatgccgaactccccatcgacacggtgatgtgcacggtggagttg
gcgcggcggctgcggctgggctccgagaacctccggctcgagacgttggccgcgcactgc
ggcgtgacgcagatgcgcccccacgatgcgctggacgacgcgctggtgctcgcgcagatc
ctcaaaccgttcctcgcgaatgcgcacgagcgcaggacctggctgccggtgcggtcggtg
tcgcggcgcacctggcccaacggccacgtcacccacgaggaactgcactcgctgcggacg
gtcgctgcccgcctgccctgcccgcaccagaatcccggccggttcgtccgtggtcgcccg
ctggtgcagggcatgcgggtcgcgatgtcgaccgaggtctcccacacctatgacgagctg
atcgagcgcatcctgcacgcggggctggcctacaccgactcggtggaccagcagacgtca
ctggtgatctgcgaccggcctgagcccgaccagggcaagggctaccaggcaggcgagatg
ggcatcccgctggtcaccgacgacgacttcatgggtctgctcaaccgcgtggtgggaggc
cgggacgtggagccgttcgtggaaccgacgtccgcgggcgagcagttcacgctgttctga
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