Mycolicibacterium sediminis: MSEDJ_05200
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Entry
MSEDJ_05200 CDS
T07629
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03030
DNA replication
msei03430
Mismatch repair
msei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSEDJ_05200
03430 Mismatch repair
MSEDJ_05200
03440 Homologous recombination
MSEDJ_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_05200
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_05200
Enzymes [BR:
msei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSEDJ_05200
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSEDJ_05200
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSEDJ_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_5
AAA_19
AAA_14
Rad17
AAA_16
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BBY26424
UniProt:
A0A7I7QJJ7
LinkDB
All DBs
Position
complement(516885..518906)
Genome browser
AA seq
673 aa
AA seq
DB search
MALYRKYRPSSLAEVVGQEHVTEPLSNALTAGRINHAYLFSGPRGCGKTSSARIMARSLN
CEKGPTPTPCGVCGSCVALAPNGPGNLDVTELDAASHNGVDDARELRDRAFYAPAESRYR
IFIIDEAHMVTPQAFNALLKIVEEPPDHLIFVFATTEPEKVLTTIRSRTHHYPFRLLAPK
TMRGLVEKICAQEDVVVDDAVYPLVIRAGGGSPRDTLSVLDQLLAGARGNRVDYASALSL
LGATDMALIDEAVDALAAGDAAALFGAVEAVIDAGHDPRRFATDLLDRFRDLIILQAVPD
AAARGVVDAPADALERMRSQADRLGAATLARYAEVVHAGLGEMRGATAPRLLLEVVCARL
LLPSASDTESALLQRIERLEMRLDVSIPAGEAAQSGATSAPAPSKQFARRSQVEPAAPES
APAAAPPPAAAIPPLPPVPVPVSQVAAAPAPAEPVAAPPPRPEPVERPAPVERPAPVERA
PEPAVRPVERAPEPTPPVERPRVDPAPPSRPEPVAPAAAHVPAAGQPDAATVRSLWTTVR
EKVRERRRPTDVMLDGAIVVAVEKDTLVLSHVSGPLAKRLNEQRNVEIIRDALKDALGVN
WNIRCEAGTPVGNPDPRAQRAGDVPMAPPPDVEDEESMLAEAQREDPAPRRDPEEVALEL
LQNELGARPIENR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtggctctctaccgcaagtaccgaccttcgtcgctcgccgaggtcgtcgggcaggaacac
gtcaccgagccactgtcgaacgcgctgactgcgggacgcatcaaccacgcctacctgttc
tccgggcctcgcggctgcggcaagacgtcgtccgcccgcatcatggcccgctcgctgaac
tgcgagaaggggccgacgcccacgccctgcggagtctgcgggtcctgcgtggcccttgca
cccaacgggccgggcaacctcgacgtcaccgaattggacgccgccagccacaacggcgtc
gacgacgcccgcgaactgcgcgatcgcgccttctacgcgcccgcagagtcgcggtaccgc
atcttcatcatcgacgaggcgcacatggtgacgccgcaggccttcaacgccctgctgaag
atcgtcgaggagccgccggaccacctcatcttcgtgttcgcgaccaccgagccggagaag
gtcctcacgaccatccggtcccggacgcatcactacccgttccggctgctggctccgaag
accatgcgcggcctcgtcgagaagatctgcgcccaggaggacgtggtcgtcgacgacgcc
gtgtaccccctggtgatcagggccggcggcggctcgccacgcgacaccctgtcggtgctc
gaccaactcctcgccggcgcccgcggcaatcgcgtcgactacgcgagcgcactctcgctg
ctcggtgccaccgacatggcgctcatcgacgaggccgtcgacgcgctggccgccggcgac
gccgccgcgctgttcggtgccgtcgaagcggtgatcgacgccgggcacgatccccgacgg
ttcgccaccgatctcctcgaccgcttccgtgacctgatcatcctgcaggccgtgccggat
gccgcggcgcgcggcgtggtcgacgcccccgccgacgcgctcgagcgcatgcgcagccag
gccgaccggctcggcgcggcgacgctggcccgctacgccgaggtggtgcacgccgggctc
ggcgagatgcgaggcgcgacggcgccgagactgctcctcgaggtggtctgcgcgcgactg
ctgctcccctccgccagcgacacggaatccgctctgctgcaacgcatcgaacgcctcgag
atgaggctcgacgtgtccattcccgcgggcgaggccgcccagtccggggccacgtcggca
cccgcgccctccaagcagttcgcccgccggagtcaggtcgagcccgccgcacccgaatcc
gcgcccgcagccgcgccaccacccgccgccgcgattccgccgctgccacccgtcccggtc
cccgtctcgcaggtcgccgccgcgccggcgcccgccgaaccggtcgcggccccgccgccg
cggcccgaacccgtcgagcggcccgcgccggtggaacgccccgcccccgtggagcgagcc
cccgaaccggccgtgcgccccgtggagcgagcccccgagccgactccgcccgtcgagcgt
ccgcgcgtcgacccggccccgccttcccggccggagcccgtggcacccgcagcggcgcac
gtgcccgccgcaggccagccggacgccgccaccgtccgcagtctgtggaccacggtgcgg
gagaaggtgcgcgaacgcaggcgacccaccgacgtcatgctcgacggggcgatcgtcgtc
gccgtcgagaaggacacgctggtgctgagccacgtctcgggtccgctggccaagcgactc
aacgagcagcgcaacgtcgagatcatccgcgacgcactcaaggacgcactcggcgtgaac
tggaacatccgttgcgaggcgggcactcccgtcggcaatccggatccgcgggcgcagcgg
gcaggggacgttcccatggcgccgccacccgacgtcgaagacgaggagagcatgctcgcc
gaggcgcagcgggaggacccggcgccccggcgcgaccccgaggaggtcgcactcgagcta
ctgcagaacgagctgggcgcccgtcccatcgagaaccgctag
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