Mycolicibacterium sediminis: MSEDJ_06930
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Entry
MSEDJ_06930 CDS
T07629
Name
(GenBank) DeoR family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_06930
Transcription factors [BR:
msei03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
MSEDJ_06930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_20
HTH_5
HTH_11
MarR_2
GntR
HTH_24
MarR
HTH_PafC
HTH_Crp_2
NAGPA
Put_DNA-bind_N
Fe_dep_repress
HTH_IclR
DUF7342
LexA_DNA_bind
Beta-prop_RSE1_2nd
TFIIE_alpha
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
BBY26597
UniProt:
A0A7I7QKV3
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Position
complement(705067..705852)
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AA seq
261 aa
AA seq
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MSIRRTDRMREVLSLLRDRGEVASHVLCDELRISPATLRRDLSELEEQGLLQRTHGGARA
LDPSGSDIPVRLRDHRMVAIKRRIAQHAAALVPAGPQAVALTGGVTTGEVARSLKGRPNM
TIVTNSLTIAADCAVDAHMKVIMTGGLVRANSLEAVGPMSEHAFQVITVGTAILGADGMS
AEVGATTYDEAEARTAIAMAANAQRVVVAVDGSKIGKVTLAKMTALDRLDHLVTDSTADP
EQLERIAAQGVRVHVVDVGDA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcagacgcaccgaccgcatgcgggaggtgctgtcgttgctgcgtgaccgcggt
gaggtcgcatcccacgtgctgtgcgacgaactgaggatctcgccggcgacgctgcggcgt
gacctgagcgaactggaggagcaggggctgctgcagcgcacccacggcggcgcacgggca
ctcgatcccagcggcagcgacatcccggtgcggctgcgcgatcaccggatggtcgccatc
aaacggcggatcgcccagcacgcggccgcgctggtgcccgccggtccgcaggcggtggcg
ctcaccggtggcgtcaccaccggggaggtcgcccgctcgctgaagggcaggccgaacatg
acgatcgtgaccaattcgctcaccatcgccgccgactgcgccgtcgacgcgcacatgaag
gtgatcatgaccggcggcctggttcgcgcgaactcgctcgaggccgtcgggcccatgtcc
gagcatgcgttccaggtgatcaccgttggcaccgcgatccttggggccgacgggatgtcc
gccgaggtcggcgccaccacctacgacgaggcggaggcgcgcaccgcgatcgccatggcg
gccaacgcacaacgcgtcgtcgtagccgtcgacggctccaagatcggcaaggtcacgctg
gccaagatgaccgcgctggaccggctcgaccacctggtcaccgactcgaccgccgatccc
gaacagctggaacggattgcggcgcagggagttcgggtgcacgtcgtcgacgtgggcgat
gcgtga
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