Mycolicibacterium sediminis: MSEDJ_10050
Help
Entry
MSEDJ_10050 CDS
T07629
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00362
Benzoate degradation
msei01100
Metabolic pathways
msei01120
Microbial metabolism in diverse environments
msei01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MSEDJ_10050 (pcaB)
Enzymes [BR:
msei01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
MSEDJ_10050 (pcaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
BBY26909
UniProt:
A0A7I7QKK9
LinkDB
All DBs
Position
complement(1003905..1005104)
Genome browser
AA seq
399 aa
AA seq
DB search
MTDLFWPGDHLAGDLMSDEAFLAAMVAVEQAWLGCLVDAGIAPPDARAELSTSEGDAEAI
ARRADVDGNPVSALVAILRDRSEPATARWLHRGLTSQDVLDTAIVVCVRDVLIRVGVECA
AQVRALADLAERHRGTEALARTLTQAALPSTLGAKVARWLDGVLDAAEPLAALRTSLPVQ
IGGAVGTLAATTELAGSVDGALALSDALADELVLAPTLPWHTTRSPITRIGDALVTCCDA
WGHIAADVATGSRPELGELAEGSGGGSSTMPHKNNPVRSVLIRRAALTAGPLGATLHAAS
AGSVDERSDGAWHAEWATLRTLARRTVVAAAHTSELVTGLRIDESRVAANLAAADGLLSE
QRAMAELTGRPPLSDYAGAADRFVEATLSRARRFLEESS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacctgttctggccgggcgaccacctcgccggcgacctgatgagcgacgaggcc
ttcctcgccgcgatggtcgcggtggagcaggcgtggctgggctgcctcgtcgacgcaggc
atcgccccgccggacgcccgggccgagctgtccacgtcggagggcgatgcggaggcgatc
gcgcgccgcgccgacgtcgacggcaaccccgtcagcgcactggtcgcgatcctgcgggac
cggtcggagcctgcgacggcacgctggctgcaccgcggtctgacgagccaggacgttctc
gacacggcgatcgtggtctgcgtgcgcgacgtgctgatcagggtcggcgtcgaatgcgca
gcccaggtgcgtgcgctcgccgatctcgccgaacgccaccgcggcaccgaggctttggct
cgcacgctcacccaggcggcgctacccagcaccctgggcgcgaaggtcgcccgctggctc
gacggcgtactggacgccgcggaaccgctggccgcactgcggacgtcactgcccgtccag
atcggcggcgcggtgggaacactggccgccaccaccgaactggccgggtcggtcgacggc
gcgctcgccctgagcgacgcgttggccgacgaactggtcctggcgcccaccctgccgtgg
cacaccacgcgctcaccgatcacccggatcggggacgcgctggtgacgtgctgcgacgcg
tggggacacatcgccgccgacgtggcgacgggcagtcgccccgaactcggtgaactggcc
gagggaagcggcggcgggtcgtcgaccatgccgcacaagaacaacccggtgcggtcggtg
ctgatccgacgcgccgcgctcaccgcgggcccgctcggtgccaccctgcacgccgcgtcg
gcgggcagcgtcgacgaacgctccgacggcgcgtggcacgcggagtgggccacgctgcgg
acgctcgcgcggcgcaccgtcgtcgccgccgcgcacacctccgaactcgtcaccgggctg
cggatcgacgagtcccgtgtcgcggccaacctcgccgccgcagacggcctgctctccgag
cagcgggcgatggccgaattgaccggtcgtccaccactttccgactacgcgggggcggcc
gaccgcttcgtcgaggcaacgctgagccgcgcccgccgcttcctcgaggagtcctcgtga
DBGET
integrated database retrieval system
