Mycolicibacterium sediminis: MSEDJ_15460
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Entry
MSEDJ_15460 CDS
T07629
Symbol
pdxS_1
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00750
Vitamin B6 metabolism
msei01100
Metabolic pathways
msei01240
Biosynthesis of cofactors
Module
msei_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
MSEDJ_15460 (pdxS_1)
Enzymes [BR:
msei01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
MSEDJ_15460 (pdxS_1)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NMO
TetR_C_27
IGPS
NanE
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
BBY27450
UniProt:
A0A7I7QN65
LinkDB
All DBs
Position
complement(1571918..1572805)
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AA seq
295 aa
AA seq
DB search
MTTSVGTARVKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVS
RMSDPDMIEGIVSAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYANHIDKW
KFTVPFVCGATNLGEALRRLTEGAAMIRSKGEAGTGDVSNATTHMRKIGGEIRRLTSLSE
DELFVTAKELQAPHDLVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIF
KSGDPAARAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEDVPQPHRLAERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtcggtgggcaccgcgcgggtgaagcgcgggatggccgagatgctcaagggc
ggcgtcatcatggacgtcgtcacaccggagcaggcgcgcatcgccgagggtgcaggagcg
gtcgcggtgatggcgctcgaacgtgtgccggccgacatccgggcccagggtggggtgtcg
cggatgagtgatccggacatgatcgagggcatcgtctcggcggtgaccattccggtgatg
gccaaggcgcgtatcgggcacttcgtggaggcgcagatcctgcagagcctcggggtggac
tacgtcgacgagtccgaggtgctgacaccggccgactatgccaaccacatcgacaagtgg
aagttcaccgtccccttcgtgtgtggcgcgacgaacctgggtgaggcgctgcggcgtctg
acagagggcgcggcgatgatccgctccaagggtgaggccggtacgggtgacgtgtcgaac
gcgacgacgcacatgcgcaagatcggtggggagatccgccggctgacctcgctgtcagag
gacgagttgttcgtcaccgcaaaggaactgcaagcaccccatgacttggtggtggaggtg
gcccgggccgggaagctgccggtgacgctgttcaccgccggcggcatcgccaccccggcc
gatgcggcgatgatgatgcagctcggcgccgagggtgtgttcgtcggctccggcatcttc
aagtccggggatccggcggcgcgggccgccgcaatcgtgaaggcgaccaccttttacgac
gatcccgacgtgctggccaaggtgtcgcgcgggctcggcgaggcgatggtcggcatcaac
gtagaggatgtgccgcagcctcaccggctggccgaacgcggctggtag
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