Mycolicibacterium sediminis: MSEDJ_16950
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Entry
MSEDJ_16950 CDS
T07629
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_16950
03036 Chromosome and associated proteins [BR:
msei03036
]
MSEDJ_16950
Transcription factors [BR:
msei03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MSEDJ_16950
Chromosome and associated proteins [BR:
msei03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
MSEDJ_16950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
AOC_like
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
BBY27599
UniProt:
A0A7I7QMI8
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All DBs
Position
1738003..1738869
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AA seq
288 aa
AA seq
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MALDAEQLAALAAVVAAGSFEGAAGTLHVTPSAVSQRIKALEQRVGQVLVRRERPCTATA
AGIPLLRLAAQSALLEAEVLAEVGGDGGSAPRVALAVNADSMATWFVRVFGSLESVLFDV
RIEDQDHSARLLREGATLGAVTTERTPVPGCRVYPLGVMRYVAAASAPFAERCFPDGFTA
RAAALAPNVAWNRDDALQHLFLRRAFRRPIDPPTHYVPSAEGFAAAVRSGVGWGMFPESL
ADADARLRPISDVHLDVPLFWQCWKLDSPLVARITDAVCTAAAAALRR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctcgacgcagaacaactcgcggcgctcgcggccgtcgtggcggccggctccttc
gagggtgcggcgggcaccctgcacgtgactccgtccgcggtgagccagcgcatcaaggca
ctcgagcagcgcgtcgggcaggttttggtccggcgcgaacggccctgcaccgcgaccgcc
gccggaatcccgctgttgcggctggccgcgcagtcggcgctgctcgaggcggaggtcctg
gcagaggtcggcggcgacggcggttcggcaccgcgcgtcgccctggcagtcaacgcggac
tcgatggccacctggttcgttcgggtcttcggcagtctggagtcggtgctgttcgacgtc
cgcatcgaggatcaggaccattcggcccggctgctccgcgagggggcgacgctgggcgcc
gtcaccaccgagcgcacgccggtgccggggtgtcgggtgtacccgctgggtgtgatgcgc
tacgtcgcggcggcgtcggcaccgttcgccgaacggtgcttccccgacgggttcaccgcc
cgcgctgcggcgctcgccccgaacgtcgcgtggaaccgggacgacgcgctgcagcacctg
ttcctccggagggcgttccggcggccgatcgacccgccgacgcactacgtgccctcggcg
gagggcttcgccgcggcagtccggtccggcgtggggtgggggatgttccccgagtctctg
gccgacgcggacgcccgactccggcccatttcggacgttcacctggacgtgccgctgttc
tggcagtgctggaagctcgacagcccgctggtcgcacgcatcaccgatgcggtctgcacc
gcagcggccgccgcactgagacggtag
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