KEGG   Mycolicibacterium sediminis: MSEDJ_19280
Entry
MSEDJ_19280       CDS       T07629                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
msei  Mycolicibacterium sediminis
Pathway
msei03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MSEDJ_19280 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msei03400]
    MSEDJ_19280 (xth)
Enzymes [BR:msei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     MSEDJ_19280 (xth)
DNA repair and recombination proteins [BR:msei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MSEDJ_19280 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: BBY27832
UniProt: A0A7I7QNG9
LinkDB
Position
complement(1988856..1989650)
AA seq 264 aa
MRIATWNVNSIRSRIDRVTDWLQRADVDVLAMQETKCKDDQFPTMPFAALGYEVVHTGVS
QWNGVAIASRVGIDDVAVGFDGQPMWDEASEARALGATCGGVRVWSLYVPNGRTVDSPHY
DYKLEWLAALDRTASGWLADDPELPIALVGDWNIAPIDEDVWDVEVFAHSTHVTERERSA
FRAIESRFADVVRPFTPGPGTYTYWDYTQLRFPKRQGMRIDFVLGSPALAARVTHAEIAR
DERKPGKKGTPAPSDHAPVVVDLD
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcggatcgccacctggaacgtcaactcgatccgctcccgcatcgaccgtgtcaccgac
tggttgcagcgcgccgacgtcgacgtgctggccatgcaggagaccaagtgcaaggacgac
cagttcccgacgatgccgttcgccgcgctcggctacgaggtcgtgcacacgggggtcagc
cagtggaacggcgtcgcgatcgcgtcgcgggtcggcatcgacgacgtcgcggtcggcttc
gacggtcagcccatgtgggacgaggcctcggaggccagggcgctgggcgcgacgtgcggc
ggggtgcgggtatggagcctgtacgtccccaacgggcggaccgtcgactcaccgcactac
gactacaagctggaatggcttgccgcgcttgatcggacggcctcggggtggctcgccgac
gatccggagctaccgatcgccctggtgggcgactggaacatcgcgcccatcgacgaggac
gtatgggacgtcgaggtgttcgcccatagcacccacgtcaccgaacgcgaacgttcggcg
ttccgtgccattgagtcgcgcttcgccgacgtggtgcgtcccttcacccccggccccggc
acgtacacctactgggactacacccagctgcggttcccgaagcgccagggcatgcgcatc
gacttcgtgctggggtcccccgccctggccgcccgcgtcacgcacgcggagatcgcgcgc
gacgagcgcaaaccgggcaagaaggggaccccggcaccgagcgaccacgcacccgtcgtg
gtcgacctcgactga

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