KEGG   Mycolicibacterium sediminis: MSEDJ_19840
Entry
MSEDJ_19840       CDS       T07629                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
msei  Mycolicibacterium sediminis
Pathway
msei00010  Glycolysis / Gluconeogenesis
msei00020  Citrate cycle (TCA cycle)
msei00260  Glycine, serine and threonine metabolism
msei00280  Valine, leucine and isoleucine degradation
msei00310  Lysine degradation
msei00380  Tryptophan metabolism
msei00620  Pyruvate metabolism
msei00630  Glyoxylate and dicarboxylate metabolism
msei00640  Propanoate metabolism
msei00670  One carbon pool by folate
msei00785  Lipoic acid metabolism
msei01100  Metabolic pathways
msei01110  Biosynthesis of secondary metabolites
msei01120  Microbial metabolism in diverse environments
msei01200  Carbon metabolism
msei01210  2-Oxocarboxylic acid metabolism
msei01240  Biosynthesis of cofactors
Module
msei_M00009  Citrate cycle (TCA cycle, Krebs cycle)
msei_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
msei_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
msei_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:msei00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MSEDJ_19840 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MSEDJ_19840 (lpdA)
   00620 Pyruvate metabolism
    MSEDJ_19840 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MSEDJ_19840 (lpdA)
   00640 Propanoate metabolism
    MSEDJ_19840 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MSEDJ_19840 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MSEDJ_19840 (lpdA)
   00310 Lysine degradation
    MSEDJ_19840 (lpdA)
   00380 Tryptophan metabolism
    MSEDJ_19840 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MSEDJ_19840 (lpdA)
   00670 One carbon pool by folate
    MSEDJ_19840 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msei04147]
    MSEDJ_19840 (lpdA)
Enzymes [BR:msei01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MSEDJ_19840 (lpdA)
Exosome [BR:msei04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MSEDJ_19840 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 FAD_oxidored DAO FAD_binding_2 HI0933_like GIDA NAD_binding_8 Thi4 3HCDH_N AlaDh_PNT_C Amino_oxidase ApbA Lycopene_cycl
Other DBs
NCBI-ProteinID: BBY27888
UniProt: A0A7I7QNB6
LinkDB
Position
2042547..2043941
AA seq 464 aa
MTHYDVVVIGAGPGGYVAAIRAAQLGLNTAIVEPKYWGGVCLNVGCIPSKALLRNAELAH
IFTKEAKQFGINGDVSFDYGSAFDRSRKVAEGRVAGVHFLMKKNKITEVHGYGKFTDDHT
VEVDLNEGGTETLTFDNAIISTGAHTKLVPGTSMSKNVITYEEQIMERDLPGSIVIAGAG
AIGMEFGYVMKNYGVDVTIVEFLPRALPNEDAEVSKEIEKAFKKLGVKILTGTKVESIED
DGDKVTVTISKDGKTEELKPDKVMQAIGFVPNVEGYGLDKTGVELTDRGGIAIDDYMRTN
KPHIYAIGDVTGKLQLAHVAEAQGVVAAETIGGAETLPLGDYRMMPRATFCQPQVASFGL
TEQQARDEGYDVKVAKFPLTANGKAHGLGEPGGFVKVIADAKYGELLGGHLIGHDVSELL
PELTLAQKWDLTVNELTRNVHTHPTLSEALQECFHGLAGHMINF
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgacccactatgacgtcgtcgtaatcggagcaggccccggcggatacgtggcggccatc
cgcgccgcgcaactcggactgaacaccgccatcgtggagcccaagtactggggtggcgtc
tgcctcaacgtcggatgcatcccgtcgaaggcgctgctgcgcaacgccgagctggcccac
atcttcaccaaggaagccaagcagttcggcatcaacggcgacgtgtcgttcgactacggg
tcggcgttcgaccgcagccgcaaggtcgccgagggccgcgtcgccggcgtgcacttcctg
atgaagaagaacaagatcaccgaggtccacgggtacggcaagttcaccgacgaccacacc
gtcgaggtcgacctcaacgagggcgggaccgagaccctcacgttcgacaacgccatcatc
tcgaccggcgcccacaccaagctggtgcccggcacgtcgatgagcaagaacgtcatcacc
tacgaagagcagatcatggagcgcgacctgcccgggtcgatcgtgatcgccggcgccggc
gccatcggcatggagttcggctacgtgatgaagaactacggcgtcgacgtcacgatcgtc
gagttcctgccgcgcgcactgcccaacgaggacgccgaggtctccaaggagatcgagaag
gcgttcaagaagctgggtgtgaagatcctcaccggcaccaaggtcgagtccatcgaggac
gacggcgacaaggtcaccgtgacgatcagcaaggacggcaagaccgaggaactcaagccc
gacaaggtcatgcaggccatcggcttcgtgcccaacgtcgagggctacggcctggacaag
accggcgtcgaactcaccgaccgcggcggcatcgcgatcgacgactacatgcgcaccaac
aagccgcacatctacgccatcggtgacgtcaccggcaagctgcagctggcgcacgtcgcc
gaggcgcagggcgtcgtcgccgccgagaccatcggcggcgcggagacgttgccgctgggc
gactaccggatgatgccgcgcgccacgttctgccagccgcaggtcgccagcttcgggctc
accgagcagcaggcccgcgacgagggctacgacgtcaaggtcgccaagttcccgctcacc
gcgaacggcaaggcgcacgggctcggcgagccgggtggtttcgtcaaggtcatcgccgac
gccaagtacggcgaactgctgggcggtcacctcatcggccacgacgtgtccgagctactc
cctgagctgacgctcgcgcagaagtgggacctcaccgtcaacgagctgacccgcaacgta
cacacgcacccgacgctgtccgaggcgctgcaggagtgcttccacggcctcgccggccac
atgatcaacttctag

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