Mycolicibacterium sediminis: MSEDJ_20420
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Entry
MSEDJ_20420 CDS
T07629
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00860
Porphyrin metabolism
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
msei01120
Microbial metabolism in diverse environments
msei01240
Biosynthesis of cofactors
Module
msei_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
msei_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSEDJ_20420 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msei04147
]
MSEDJ_20420 (hemB)
Enzymes [BR:
msei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
MSEDJ_20420 (hemB)
Exosome [BR:
msei04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MSEDJ_20420 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
BBY27946
UniProt:
A0A7I7QQ22
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All DBs
Position
2102125..2103057
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AA seq
310 aa
AA seq
DB search
MRRLVSQTSLEPRHLVLPMFIADGIDEPRPIASMPGVVQHTRDSLRRAAVDAVAAGVGGL
MLFGVPRDEDKDAIGSAGTDRDGILNVGLRELAAEVGDATVLMADTCLDEFTDHGHCGVV
DASGRVDNDITNARYVELAVAQAESGAHVISPSGMMDGQVAAIRDGLDAAGHTDAAILAY
AAKFASGFYGPFREAVASSLSGDRRTYQQNPGNAREAMHEIELDLDEGADIIMVKPAMSY
LDLVRAAADVSPVPVAAYQVSGEYSMISAAAAKGWIDLETVALETLVGIRRAGADIVLSY
WAADVAGWLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggctggtctcgcagacgtcgctggaaccgcggcacctggtgctgcccatgttc
atcgccgacggcatcgacgaaccgcggcccatcgcgtcgatgccgggcgtcgtgcagcac
acccgcgactcgctgcgccgcgccgcggtcgacgccgtggccgcgggcgtcggcggtctc
atgctgttcggcgtcccccgcgacgaggacaaggatgcgatcggttcggcgggcaccgac
cgggacggcatcctcaacgtcgggctgcgcgagttggcggcggaggtcggcgacgccacg
gtgctgatggccgacacctgcctcgacgagttcaccgaccatggacactgcggcgtggtc
gacgcctccggtcgggtcgacaacgacatcaccaacgcccgatacgtggaactcgccgtc
gcacaggcggagtcgggcgcccacgtgatcagtccgagcgggatgatggacggtcaggtg
gccgccatccgcgacggtctggacgccgccggtcacaccgacgcggcgatcctggcgtac
gccgcgaagttcgcctccggcttctacggcccgttccgcgaggcggtggcctccagcctg
tccggcgatcgccgtacctaccagcagaatccgggcaacgcgcgggaggcgatgcacgag
atcgaactcgacctcgacgagggcgccgacatcatcatggtcaagcccgcgatgtcgtat
ctggacctggtccgcgccgccgccgacgtgtcaccggtgcccgtcgccgcctatcaggtg
tcgggggagtactcgatgatcagcgcggctgcggccaaggggtggatcgacctggagaca
gtcgcgctggagaccctggtcggcatccgccgcgcgggcgccgacatcgtgctgagctac
tgggcggccgacgtcgccggctggttggcgtga
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