Mycolicibacterium sediminis: MSEDJ_22050
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Entry
MSEDJ_22050 CDS
T07629
Symbol
vsr_1
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_22050 (vsr_1)
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
MSEDJ_22050 (vsr_1)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
BBY28109
UniProt:
A0A7I7QNY1
LinkDB
All DBs
Position
2268027..2268431
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AA seq
134 aa
AA seq
DB search
MQSMPRRDTAIELALRRELHRLGLRFRVNLRPLPGTPDIALTRAKVAVFVDGCFWHRCPH
HGTSPKNNSAWWASKLDANVERDRRKDRQLADLGWISLHVWEHEDPATAAEAIRKLWMER
TSPSAGQTHSVRGS
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccatgccccgccgcgacacggcgatcgagctggcactccgccgtgaactgcac
agactggggctacgatttcgagtgaacttgcggccgctccccggcacccccgacatcgcg
ttgactagagccaaggtagccgtgttcgtcgacggttgcttctggcatcgctgcccgcac
cacggcacgtcgccaaagaataattcagcttggtgggcgtcgaagctcgacgcaaatgtt
gagcgtgaccggcgcaaggaccggcagctagcggatctcgggtggatctcactgcatgtc
tgggagcatgaggatccggcgactgctgccgaggcgattcgcaaactttggatggaacga
accagtccttcggcgggtcaaacccatagtgtcagaggttcgtga
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