Mycolicibacterium sediminis: MSEDJ_22180
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Entry
MSEDJ_22180 CDS
T07629
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_22180
03036 Chromosome and associated proteins [BR:
msei03036
]
MSEDJ_22180
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_22180
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MSEDJ_22180
Chromosome and associated proteins [BR:
msei03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MSEDJ_22180
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MSEDJ_22180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
NOV_C
HU-HIG
CAV_VP3
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
BBY28122
UniProt:
A0A7I7QPI5
LinkDB
All DBs
Position
2283532..2284239
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AA seq
235 aa
AA seq
DB search
MNQADLLELLARNMGTDRLEAAAALGNFVDTIVRVVHGGDRVGITGFGVFEQRRQTVRTG
RDPRTGETVKVKSTTPVFRPSAQLKALIAGVQRPQAVGRAAGLGADLCGANEAAAPTGRT
QVRRSSDSSEVQDRLDAVGEISRPRRVHPSRRRTAAENKAIEKQAVHLVCRYFAAQHYVT
TDVGATESYDVRAVRAGQVIKIEVKGTTSDGSEIILTYNEVELHEPETQATRSQS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggcggaccttttggaactgctagcgcggaacatgggcacggatcgtttagaa
gcggccgcggctttgggaaactttgtcgacacgatcgtccgagtcgtgcacggcggtgac
agagtcggcatcacagggttcggcgtgttcgagcagcgccgtcagacggtccgtacaggg
cgcgatccgcgaaccggggaaaccgtcaaggtcaagtccactaccccggtgttccgccca
agcgcacaacttaaagcgctcatcgccggagtgcagcgtccccaagcggtagggcgagcg
gcaggacttggtgcggacctgtgtggtgcgaatgaggccgccgctccaaccgggagaact
caggtgcgccgctcatcagacagctctgaggtgcaggacagactcgatgccgtcggggag
atcagccgcccacgcagggttcatccttcaagacgccggaccgctgccgagaacaaagcc
atcgagaaacaagctgtacacctggtatgccggtactttgcagcccagcactacgtgacc
accgatgtcggagccacggagtcctacgacgtccgcgctgtaagagccggtcaagtaatc
aagatcgaggtcaaagggaccacctccgacggatccgagatcatcctgacctacaacgaa
gtcgagctgcacgaacccgagacacaggcaacgcgctcgcagtcgtaa
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