Mycolicibacterium sediminis: MSEDJ_22800
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Entry
MSEDJ_22800 CDS
T07629
Symbol
ydiO
Name
(GenBank) putative BsuMI modification methylase subunit YdiO
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00270
Cysteine and methionine metabolism
msei01100
Metabolic pathways
Module
msei_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MSEDJ_22800 (ydiO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_22800 (ydiO)
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_22800 (ydiO)
03036 Chromosome and associated proteins [BR:
msei03036
]
MSEDJ_22800 (ydiO)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
msei02048
]
MSEDJ_22800 (ydiO)
Enzymes [BR:
msei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
MSEDJ_22800 (ydiO)
Transcription factors [BR:
msei03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
MSEDJ_22800 (ydiO)
DNA replication proteins [BR:
msei03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
MSEDJ_22800 (ydiO)
Chromosome and associated proteins [BR:
msei03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
MSEDJ_22800 (ydiO)
Prokaryotic defense system [BR:
msei02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
MSEDJ_22800 (ydiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DUF4781
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BBY28184
UniProt:
A0A7I7QPE5
LinkDB
All DBs
Position
complement(2343112..2344374)
Genome browser
AA seq
420 aa
AA seq
DB search
MLASPPDARPDVGFERFRTRAGVYERILNRRDGRTVTSTLAQAPDEGTGPADADDAERAW
LQSTTPPAVTGTRRAVRTIDLFAGCGGLSIGLAEAARALNRPFRPLLAVDLDATAVSTYA
TNFPTAAALRTDVEQLLPGDVGAALTPAERLLARRHRDVDVLVGGPPCQGHSDFNNRTRH
VDDKNELYRTMVRAAEVFTPTHVLIENVPGAINDRRAVVQRTADALTHLGYTVTVGVVNL
AEIGVPQTRRRLILMASLAHSLTPAEVVDRHRRDTRTVAWAFRDLEDTDPTTLLDATAKS
APDTRRRIDHLFDHGRFELPDSQRPACHAGGGHSYKSIYGRLTWDRPAQTVTTGFYSMCM
GRNVHPSRRRTITAHEAARLQCIPDWFSFDGVQRRTALARMIGNAVPSRLSYAVALEWLR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcctcccctcccgacgccaggccagacgtcgggttcgagcggttccgcacccgg
gccggcgtctacgagcggatccttaaccgccgtgacggccgcacggtcaccagcacgctc
gcccaggcgcccgacgaaggcaccggccccgctgacgccgacgacgccgaacgggcgtgg
ctccagagcaccaccccgcccgccgtgaccggtacgcgccgagcggtccgcacgatcgac
ctgttcgccggctgcggcggtctgtcgatcggcctcgccgaagccgcccgcgccctcaac
cgccccttccggccgctgctcgccgtcgacctcgacgccacggcagtgagcacctatgcg
accaactttcccactgccgccgcgctgcgcaccgacgtcgagcagctgctgcccggcgac
gtcggcgccgcgctcacccccgccgaacgcctgctggcgagacggcaccgcgacgtcgac
gtgctcgtcggcggcccaccgtgccagggccacagcgacttcaacaaccgcacccgccac
gtcgacgacaagaacgagctgtaccgcaccatggtccgcgccgccgaggtgttcacgccg
acgcacgtcctgatcgagaacgtcccgggtgcgatcaacgaccgccgcgcggtcgtgcag
cgcaccgccgacgccctcacccacctcggctacaccgtcaccgtcggcgtggtgaacctc
gccgagatcggcgtcccacagacccgccgccgcctcatcctgatggccagcctggcgcac
tccctcactcccgcagaggtggtcgaccggcaccgccgcgacacccggaccgtcgcctgg
gcgttccgcgacctcgaggacaccgatcccacgaccctcctggacgcgacggcgaagtcc
gcacccgacacccgccgccgcatcgaccacctcttcgaccacggccgcttcgaactcccc
gacagccagcggcccgcctgtcacgccggcggcgggcacagctacaagtccatctacggc
cgcctcacatgggaccggcccgcgcagaccgtcaccacgggcttctacagcatgtgcatg
ggacgcaacgtccacccgagcaggcggcgcaccatcaccgcgcacgaagccgcacggctg
caatgcattccggactggttttccttcgacggcgtccagcggcgcaccgcgctggcacga
atgatcggcaacgccgtgccctcgcggctcagctacgccgtcgcgctggagtggctgcga
tga
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