Mycolicibacterium sediminis: MSEDJ_24960
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Entry
MSEDJ_24960 CDS
T07629
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSEDJ_24960 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msei03019
]
MSEDJ_24960 (groL2)
03110 Chaperones and folding catalysts [BR:
msei03110
]
MSEDJ_24960 (groL2)
03029 Mitochondrial biogenesis [BR:
msei03029
]
MSEDJ_24960 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msei04147
]
MSEDJ_24960 (groL2)
Enzymes [BR:
msei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSEDJ_24960 (groL2)
Messenger RNA biogenesis [BR:
msei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSEDJ_24960 (groL2)
Chaperones and folding catalysts [BR:
msei03110
]
Heat shock proteins
HSP60 / Chaperonin
MSEDJ_24960 (groL2)
Mitochondrial biogenesis [BR:
msei03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSEDJ_24960 (groL2)
Exosome [BR:
msei04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSEDJ_24960 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
MSEDJ_24960 (groL2)
Exosomal proteins of breast cancer cells
MSEDJ_24960 (groL2)
Exosomal proteins of colorectal cancer cells
MSEDJ_24960 (groL2)
Exosomal proteins of bladder cancer cells
MSEDJ_24960 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBY28400
UniProt:
A0A7I7QQT6
LinkDB
All DBs
Position
2565681..2567306
Genome browser
AA seq
541 aa
AA seq
DB search
MSKQIEFNETARRAMEAGVDKLADAVRVTLGPRGRHVVLAKAFGGPVVTNDGVTIAREID
VEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAIIKAGLRNIAAGANPIAFGAGIS
KAADAVSEALLAAATPVKDENSIAQVATVSSRDAEVGKLVGEAMTKVGADGVVTIEESST
LNTELEVTEGVGFDKGFTSAYFITDFDSQEAVLEDALVLLHRDKISSLPDLLPLLEKVAE
SGKPLLIIAEDVEGEALSTLVVNAIRKTLKAVAVKAPFFGDRRKAFLDDLAVVTGGQVVN
PDVGLLLREVGLDVLGTARRVVVNKDSTVIVDGGGADDAIEGRKSQLRSEIENTDSDWDR
EKLEERLAKLAGGVAVIKVGAATETDLKKRKEAVEDAVSAAKAAVEEGIVTGGGAALVQA
RSALDGLRSTVTGDEALGVEVFASALSSPLYWIATNAGLDGAVVVNKVAELPAGQGFNAA
TLSYGDLLADGIVDPVKVTRSAVLNAASVARMILTTETAIVEKPAESEDDGHGHGHHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagattgagttcaacgagactgcgcgccgggccatggaggcgggtgtcgac
aagctcgccgacgcggtacgcgtcacgctcggtccgcgcggccggcacgtcgtgttggcc
aaggccttcggcggtccggtcgtgaccaacgacggcgtcaccatcgcccgcgagatcgac
gtcgaggatcccttcgagaacctcggcgcccagctggtcaagtccgtcgccaccaagacc
aacgacgtggccggtgacggcaccaccacggcgaccgtcctggcccaggcgatcatcaag
gcggggctgcgcaacatcgccgccggcgccaacccgatcgcattcggcgcaggcatctcc
aaggccgccgacgcggtgtccgaggcgctgctggccgcggccaccccggtgaaggacgag
aattccatcgcgcaggtcgccaccgtctcctcgcgcgacgcggaggtcggcaagctggtc
ggcgaggcgatgaccaaggtcggtgccgacggcgtcgtcaccatcgaggagtcctccacg
ctgaacaccgagctcgaggtcaccgagggcgtcggcttcgacaagggattcacgtcggcg
tacttcatcaccgacttcgattcgcaggaagcggtcctcgaggacgcgctggtactcctg
caccgggacaagatcagctcgctgccggacctccttcccctcctggagaaggtcgccgag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctgtccaccctg
gtggtcaacgccatccgcaagacgctcaaggccgttgcggtcaaggcgccgttcttcggt
gaccgtcgcaaggcgttcctggacgacctcgcggtcgtcaccggcggtcaggtggtgaac
cccgacgtgggtctgctgctgcgcgaggtcggcctggacgtgctcggcacggcccgacgc
gtcgtggtcaacaaggacagcaccgtgatcgtcgacggcggcggcgccgacgacgcgatc
gagggtcgcaagtcgcagctgcgcagcgagatcgagaacacggattccgactgggatcgc
gagaagctcgaggagcgtctggccaagctggccggcggcgtcgccgtcatcaaggtcggc
gcagccaccgagacggacctcaagaagcgcaaggaagccgtcgaggacgccgtctcggcg
gccaaggcggccgtcgaggagggcatcgtcaccggtggtggcgcagccctcgtccaggcc
cgctcggccctcgacggtctgcgctcgacggtcaccggcgacgaggcactcggcgtcgag
gtgttcgcctcggcgctgtcgtcaccgctgtactggatcgccaccaacgccggtctcgac
ggcgcggtcgtcgtgaacaaggtcgccgaactgccggcgggtcagggcttcaacgccgcg
accctgtcgtacggcgacctgctcgccgacggcatcgtcgaccccgtgaaggtgacccgt
tcggcggtgctcaacgcagcgtccgtcgcacggatgatcctcaccacggagaccgccatc
gtcgagaagcctgccgagtccgaggacgacggacacggccacgggcatcacggacacgcc
cactag
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