Mycolicibacterium sediminis: MSEDJ_33350
Help
Entry
MSEDJ_33350 CDS
T07629
Name
(GenBank) polyketide synthase
KO
K12441
phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B [EC:
2.3.1.292
]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msei01004
]
MSEDJ_33350
01008 Polyketide biosynthesis proteins [BR:
msei01008
]
MSEDJ_33350
Enzymes [BR:
msei01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.292 (phenol)carboxyphthiodiolenone synthase
MSEDJ_33350
Lipid biosynthesis proteins [BR:
msei01004
]
Polyketide synthase
Modular PKS
MSEDJ_33350
Polyketide biosynthesis proteins [BR:
msei01008
]
Polyketide synthase (PKS)
Modular type I PKS
cis-AT PKS
Phthiocerol / Phenolphthiocerol PKS
MSEDJ_33350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
KR
PP-binding
KAsynt_C_assoc
Thiolase_N
adh_short
RhiE-like_linker
Epimerase
NAD_binding_10
NmrA
CurL-like_PKS_C
GDP_Man_Dehyd
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BBY29239
UniProt:
A0A7I7QS78
LinkDB
All DBs
Position
complement(3453627..3458390)
Genome browser
AA seq
1587 aa
AA seq
DB search
MTDALDAADLRHWLTDYLVTTIGCSPDDVDPNASFNDLGVGSRDSVVLSGVLAERIGRAV
SPVEFWEHPTINSLARFLTEPEPEPSLEPAAQRGGGSIDEPIAVIGLGCRFPAGIDGPEG
LWRFLDDGGSAITEVPADRWTPFDDGSAEVAALLKDTTKWGSFLDDVDAFDAEFFDIMPR
EAAKMDPQQRLLLEVAWEALEHAGTAPNTLRHSQTGVFIGACVSEYGYLASADLPTVDAW
NNTGGALSIIANRLSYFLDLRGPSLTVDTACSSSLVAIHLACQSLRTGDSDVALAGGVNL
LMSPAVFRGFDQAAALSPTGACHSFDAAADGFVRGEGCGVAVLKRLSDAQRDGDRVLAVV
RGSAVNQDGRSNGLMAPNPAAQMAVLRRAYENAGVSPRDVDYVEAHGTGTFLGDPIEARA
LGTVLGRGRPADAPLLIGAVKSNLGHLEAAAGIAGFIKTVLSVQRARIPGNHHFDTPNPH
IAFDKLRLQVAAAHQDWPTHGRARRAGVSSFGFGGTNAHIVLEQAPAGVAGAAVDLPEIT
TLPIFGKTDARVATTAAALADWMTGAGAGVPLADIAHTLRHHRDPSNRVASICARDRDQA
LAGLRALAAGEPADTVVEPGAGPTRSGTVFVYSGQGSHWTGMGRRLLADEPAFAAAIAEL
EPTFVERVGFSLHQVLSEGEEVRGDARVQPVLVGLQLALTALWRSYGVHPDAVIGHSVGE
VSAAVVSGALSVADGLTVVAHRSRLMSRLAGQGAVALLKLDSDATEVAIADFADVSIAGR
LAPNQTVIAGLPDQVDAVIAAVSAQNRFARRVNMEVASHTALMDEVLPELRTQLAGLSPN
SPAIPFFSTVQDPMGAPVHDAEYWAANVRRPVLFADAVVAAARDHGTFVEISAHPILASA
VAETLESDPHLSIGTLRRDGDDTLNFHLGVATVSPLSPTAPHPPEPHPLLPTTPWHHGRH
WISVAAPRRIAAAATDGVPAEWFSEMTWPQKDLATPAPQTVGSWLVVGDDDVVAEVVAAL
GPRIHVNALAPSALEDAEPATLVDVLAGTSHVVYAPGVTSSGLDAETGYRLFGSAKALTT
AITRLMLPPKLFLLTRDAQPIAEGDAANPAQAVLWGLGRTLALEHPEIWGAVIDVEATTS
APEIARIVLAEATGSDGEDQVVHRGGSRHVPRLRRVTPDLADAIPLDGDHCHLVIGATGN
IGPYLIAQLADMKASTVVAVSRNPGERLDDLAAALAEKGSTLITVAADAADEGDMRALFD
RFGADLPPLGGIYLAAFGGGPVTLADMTDEHVAAMFRPKLDVLALLHELSLSHAVQRFVL
FSSISGLLGSRWLAHYAATTTYLDTFAYARRAAGLPATTVNWGFWKSLADHQSPEELNVT
VASGLIPMSDDVAIAALSTVTAPTAAVRSCVVAADWDLLATAYRTRASLHVIDDLIAGAD
APVSDVSGGGGPVSVPSTDFRQSLREREPEGRRALLTQHVTALVATVMGLDSPHSLDPKA
GFFHFGMDSLMSVTLQRALTTSLGISVPASVVFDYPTVEALVGHLADTLPEFGDDTTGPA
GDDDRDYDHLSEDELFALLSERLGSSR
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccctcgacgcggccgacctccggcactggctgaccgactatctggtcacc
accatcggctgcagcccggacgacgtcgacccgaatgcgtccttcaacgacctcggcgtc
ggctccagggactcggtggtgctctcgggcgttctcgccgaacgcatcggccgggcagtg
tcgccggtggagttctgggaacaccccacgatcaactcgctggcacggttcctcaccgag
ccggagccggaaccgtcgctggaaccggcggcccagcgcggcggcggctcgatcgacgag
cccatcgccgtcatcgggctcggttgccgcttcccggccggcatcgacggccccgagggc
ctgtggcgattcctcgacgacggcggttcggccatcaccgaggtccccgcggaccggtgg
acgcccttcgacgacggctcggccgaggtcgccgcgctgttgaaggacaccaccaagtgg
gggtcgttcctcgacgacgtcgacgccttcgacgcggagttcttcgacatcatgccgcgt
gaagcggcgaagatggatccccagcagcggctcctgctcgaagtcgcctgggaggcactc
gaacacgcgggcaccgcgccgaacacgctgcgccacagccagaccggcgtcttcatcggc
gcctgcgtcagcgagtacgggtacctcgcctcggcggaccttcccaccgtcgacgcgtgg
aacaacaccggcggcgcgctgagcatcatcgccaaccggctctcctacttcctcgacctg
cgcgggccctcactgaccgtcgacacggcgtgttcgtcctcgttggtcgcgatccacctc
gcctgccagagcctgcggacgggcgactccgacgtcgcgctcgccggcggcgtgaacctg
ctgatgtcgcccgccgtcttccgcggcttcgaccaggccgcagcgctgtcgccgacgggt
gcgtgccactccttcgacgccgccgccgacggtttcgtgcgcggcgaggggtgcggcgtc
gccgtgctcaaacgcctctccgacgcccagcgcgacggtgaccgcgtgctggccgtcgtc
cgcgggtccgcggtcaaccaggacggcaggtccaacggtctgatggcccccaatccggcg
gcacagatggcggtgttgcgcagggcctacgagaacgccggtgtctcgccgcgcgacgtg
gactacgtcgaggcgcacggcacgggaaccttcctcggagacccgatcgaggcccgtgcg
ctcgggaccgtcctcggtcgcggccgccccgccgacgcaccgctgctcatcggagccgtc
aagtccaacctcgggcacctcgaggccgccgcgggcatcgccgggttcatcaagacggtg
ctctccgtccagcgcgcgcggatccccggcaaccaccacttcgacacccccaacccgcac
atcgcgttcgacaagctcaggttgcaggtcgccgcggcccatcaggactggcccacccac
ggccgggcccgtcgcgccggggtgtcgtccttcggcttcggcggcaccaacgcccacatc
gtgctcgagcaggcccccgccggcgtcgccggtgcggcggtcgacctccccgagatcacc
acgctgccgatcttcggcaagaccgatgcccgggtggccacgacggcagccgcactcgcc
gactggatgaccggtgcaggcgcgggcgtgccactcgccgacatcgcccacacactgcgt
caccaccgcgatccgtccaaccgggtcgcgtcgatctgcgccagggaccgggatcaggct
ctcgcgggactgcgggcgctcgccgccggcgagccggccgacaccgtcgtggaaccgggc
gccggtccgacgcgctcggggaccgtgttcgtctactccgggcagggctcgcactggacc
gggatgggccgccgcctcctcgcggacgagccggccttcgccgccgcgatcgccgagctg
gagccgacgttcgtcgagcgggtcgggttctcgctgcatcaggtgctcagtgagggcgaa
gaagtccgcggcgacgcacgggtgcagcccgtgctcgtcggactgcagttggcgctcacc
gcgctgtggcgctcctacggcgtgcatcccgacgccgtgatcggccattcggtgggcgag
gtcagcgccgccgtggtgtccggagcactgagcgtggccgacggcctgaccgtcgtcgcg
caccgctcccggctgatgtcccggctcgccgggcagggagcggtggcgctgctcaagctc
gactccgacgccaccgaggtcgcgatcgccgacttcgccgacgtgagcatcgccggtcgc
ctggcgccgaaccagaccgtgatcgcgggcctgcccgaccaggtggacgcggtgatcgcc
gcggtgagcgcgcagaaccggttcgctcggcgcgtcaacatggaggtcgcctcccacacc
gcactgatggacgaggtactgccggaactgcggacgcaactggccggcctcagcccgaat
tcgcctgccatcccgttcttctcgacggtgcaggacccgatgggcgcaccggtgcacgac
gccgagtactgggcggcgaacgtgcgccggcccgttctcttcgccgacgcggtcgtggcg
gcagcgcgcgaccacggcaccttcgtcgagatcagcgcgcacccgattctcgcctcggcc
gtcgccgagacgctcgagtcagatccgcacctgagcatcggcaccctgcgccgcgatggg
gacgacacactcaacttccatctcggcgtggcgacggtgagtcccctgtcacccaccgca
ccgcacccgccggagccgcatccgctgttgccgaccactccgtggcatcacggccgccac
tggatcagcgtcgccgcgccacgacgcatcgccgccgccgccaccgacggggtccccgcc
gagtggttcagcgagatgacctggccgcagaaggatctggccacgccggcgccgcagacc
gtgggctcgtggctagtcgtcggcgacgacgacgtggtggcggaggtcgtcgcggcgctc
ggccctcggatccacgtcaacgcgctggctccctcggctctcgaggacgccgagccggcc
accctggtcgacgtcctggccggcaccagccacgtggtctacgcgcccggcgtcacgtcg
tcgggcctcgacgccgagaccggctaccgcctgttcggttcggccaaggcgctgacgacg
gccatcacacggttgatgttgccgcccaagctgttcctgctgacccgggatgcccaaccg
atcgccgagggcgacgccgccaaccccgcgcaggcggtgctgtggggcctcggccgcacg
ctggccctcgagcaccccgagatctggggtgccgtcatcgacgtcgaggcgaccacctcg
gcgccggagatcgcgcgcatcgtgctggccgaggccaccggaagcgacggagaggatcag
gtcgtccatcgcggcgggtcccggcacgtgccgcggctgcgtcgtgtcacgcccgacctg
gctgacgcgatccccctggacggcgatcactgccacctcgtcatcggggcgaccggcaac
atcggcccatacctcatcgcgcagttggccgacatgaaggcgtcgaccgtcgtcgcggtg
tcccgcaatcccggggagcgactcgacgacctggctgcggcgctggcggagaagggctcg
acgctgatcaccgtcgccgcggacgccgcggacgagggcgacatgcgggcactgttcgac
cgcttcggcgcggacctcccgccgctcggtgggatctatctcgcggcgttcggcggcgga
ccggtcaccctggccgacatgaccgacgagcacgtcgccgcgatgttccgtccgaagctc
gacgtgctggcgctcctgcacgaactctcgctgtcgcatgcggtgcagcggttcgtgctg
ttctcgtcgatctcgggcctgctcggttcccggtggctcgcgcactacgcggcgaccacc
acctacctggacacgttcgcctacgcccgccgcgccgcgggtcttcctgcgacgacggtc
aactggggcttctggaagtcgctggccgaccatcagagcccggaggaactgaacgtgacc
gtggcgtccggcctcatccccatgagcgacgacgtcgcgatcgcggcgctgagcacggtc
accgctccgacggccgcggtgcggtcgtgcgtggtggcggccgactgggatctgctggcg
accgcctaccgcacgcgtgcgtcgctgcacgtcatcgacgacctgatcgcgggtgcggac
gccccggtgtcggacgtgtccggtggcggcggtccggtgtcggtgcccagcaccgacttc
cgccagtcgctgcgggagcgtgagcccgagggcaggcgcgcgctgctgacccagcacgtg
accgcgctcgtcgcgacggtgatgggccttgattcgccgcactcgctggatccgaaggcc
gggttcttccacttcggcatggactccctcatgagcgtcacgctgcaacgggcgctcacc
acgagcctgggcatctcggtgccggcgtcggtggtgttcgactaccccaccgtcgaggcc
ctcgtcgggcatctcgccgacaccctgcccgaattcggcgacgacacgaccggcccggcc
ggcgacgacgaccgggactacgaccacctgtccgaagacgaactcttcgcgctactctcc
gaaaggttgggctcttctcgatga
DBGET
integrated database retrieval system