KEGG   Mycolicibacterium sediminis: MSEDJ_33440
Entry
MSEDJ_33440       CDS       T07629                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
msei  Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:msei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msei03032]
    MSEDJ_33440
   03036 Chromosome and associated proteins [BR:msei03036]
    MSEDJ_33440
   03400 DNA repair and recombination proteins [BR:msei03400]
    MSEDJ_33440
DNA replication proteins [BR:msei03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MSEDJ_33440
Chromosome and associated proteins [BR:msei03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MSEDJ_33440
DNA repair and recombination proteins [BR:msei03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MSEDJ_33440
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 Mitofilin HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: BBY29248
UniProt: A0A7I7QS99
LinkDB
Position
3468833..3469540
AA seq 235 aa
MNKAELIDVLTDKLGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQKLPSDGPAVKRGATAAPARKTAVKKAA
VKKAAPAKKAATPAKKAATPAKKAATPAKKAPAAKKAATPAKKAATPAKKAATPAKKVST
PAKKAPAAKKAATPAKKAATPAKKAAAPAAKKAATKAPAKKAPAAKKAPAKKGRR
NT seq 708 nt   +upstreamnt  +downstreamnt
atgaacaaggcagagctcatcgatgtcctcacggacaagttgggcaccgaccgccggcag
gcaactgccgcggtagaaaacgtcgtcgacacgatcgtccgtgccgtccacaagggcgac
agcgtgacgatcaccgggttcggcgtgttcgaacagcgccgccgtgcggcgcgtgtcgca
cgcaacccgcgcaccggtgagaccgtcaaggtcaagccgacgtcggtcccggcattccgg
cccggcgcacagttcaaggcggttgtgtctggcgcacagaagctcccgtcggatggcccc
gccgtgaagcgtggcgccaccgccgcgccggcacgcaagaccgcggtcaagaaggccgcc
gtcaagaaggccgctccggccaagaaggcagcgacgcccgccaagaaggcagcgacgccg
gccaagaaggcagcgacgccggccaagaaggcacccgccgccaagaaggctgcgacgccg
gcgaagaaggctgccacgcctgccaagaaggctgcgacgcccgcgaagaaggtgtcgact
ccggccaagaaggcacccgccgccaagaaggctgcgaccccggcgaagaaggctgccacg
cctgccaagaaggctgctgcaccggccgccaagaaggccgccaccaaggctccggccaag
aaggcaccggctgccaagaaggcgccggccaagaagggccgccgctag

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