Mycolicibacterium sediminis: MSEDJ_33440
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Entry
MSEDJ_33440 CDS
T07629
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_33440
03036 Chromosome and associated proteins [BR:
msei03036
]
MSEDJ_33440
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_33440
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MSEDJ_33440
Chromosome and associated proteins [BR:
msei03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MSEDJ_33440
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MSEDJ_33440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Mitofilin
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BBY29248
UniProt:
A0A7I7QS99
LinkDB
All DBs
Position
3468833..3469540
Genome browser
AA seq
235 aa
AA seq
DB search
MNKAELIDVLTDKLGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQKLPSDGPAVKRGATAAPARKTAVKKAA
VKKAAPAKKAATPAKKAATPAKKAATPAKKAPAAKKAATPAKKAATPAKKAATPAKKVST
PAKKAPAAKKAATPAKKAATPAKKAAAPAAKKAATKAPAKKAPAAKKAPAKKGRR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgtcctcacggacaagttgggcaccgaccgccggcag
gcaactgccgcggtagaaaacgtcgtcgacacgatcgtccgtgccgtccacaagggcgac
agcgtgacgatcaccgggttcggcgtgttcgaacagcgccgccgtgcggcgcgtgtcgca
cgcaacccgcgcaccggtgagaccgtcaaggtcaagccgacgtcggtcccggcattccgg
cccggcgcacagttcaaggcggttgtgtctggcgcacagaagctcccgtcggatggcccc
gccgtgaagcgtggcgccaccgccgcgccggcacgcaagaccgcggtcaagaaggccgcc
gtcaagaaggccgctccggccaagaaggcagcgacgcccgccaagaaggcagcgacgccg
gccaagaaggcagcgacgccggccaagaaggcacccgccgccaagaaggctgcgacgccg
gcgaagaaggctgccacgcctgccaagaaggctgcgacgcccgcgaagaaggtgtcgact
ccggccaagaaggcacccgccgccaagaaggctgcgaccccggcgaagaaggctgccacg
cctgccaagaaggctgctgcaccggccgccaagaaggccgccaccaaggctccggccaag
aaggcaccggctgccaagaaggcgccggccaagaagggccgccgctag
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