KEGG   Mycolicibacterium sediminis: MSEDJ_33500
Entry
MSEDJ_33500       CDS       T07629                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
msei  Mycolicibacterium sediminis
Pathway
msei00470  D-Amino acid metabolism
msei00550  Peptidoglycan biosynthesis
msei01100  Metabolic pathways
msei01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:msei00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MSEDJ_33500 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    MSEDJ_33500 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    MSEDJ_33500 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:msei01011]
    MSEDJ_33500 (ddl)
Enzymes [BR:msei01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     MSEDJ_33500 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:msei01011]
 Precursor biosynthesis
  Amino acid ligase
   MSEDJ_33500 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_3 RimK ATP-grasp_4
Other DBs
NCBI-ProteinID: BBY29254
UniProt: A0A7I7QSG8
LinkDB
Position
3475752..3476855
AA seq 367 aa
MTARIRVAVVYGGRSSEHAISCVSAGSILRNLDPERFEVVAVGISPEGSWVLTDGRPETL
AITDGRLPAVSGDSGTELALTADPARRGQLLSLGRGAGEMLAAVDVVFPVLHGPYGEDGT
IQGLLELAGVPYVGAGVLASAAGMDKEFTKKLLAAEGLPIGDQVVLRPGEPTVTLEDRER
LGLPAFVKPARGGSSIGVSRVTAWDQLPQAIDNARRHDPKVIVEAAVPGRELECGVLEFP
DGSIEASTVGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVDDGIADEIRGLAVRAF
RAIDGQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETAV
ARGTGLR
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgactgcccgcatccgcgtcgccgtcgtctacggcggacgcagctctgagcacgcgatc
tcgtgcgtgtccgcaggcagcatcctgcgcaacctcgaccccgagcgcttcgaggtggtc
gccgtcggcatctcgccggaggggtcctgggtgctgaccgacggacgtccggagacgctc
gccatcaccgacgggcgactgcccgccgtgagtggcgactccggcaccgagttggcgttg
accgccgatcccgcccggcgcggccaactgctgtccctgggccgcggagcgggggagatg
ctggccgcggtcgacgtcgtgttccccgtgctgcacggtccctacggcgaggacggcacc
attcagggtctgctcgaactcgccggggtgccctacgtcggtgcgggcgtgctggccagc
gcggccggcatggacaaggagttcacgaagaagctgctcgcggccgagggactgccgatc
ggggatcaggtcgtgctgcgaccgggtgagccgaccgtgacgctcgaggaccgtgagcgg
ctcgggcttccggcgttcgtcaaacccgcgcgcgggggatcgtccatcggggtcagccgc
gtcaccgcgtgggaccagctgccgcaggcgatcgacaacgcccgcaggcacgacccgaag
gtcatcgtcgaggccgcggtgcccggacgcgaactcgagtgcggcgtcctggaattcccg
gacggctcgatcgaggccagcaccgtcggggagatccgcgtggcgggcgtccgcggacgc
gaggacgggttctacgacttcgagaccaagtacctcgacgacgccgccgaactcgacgtc
cccgccaaggtcgacgacgggatcgccgacgagatccgcgggctggcggtccgtgccttc
cgcgccatcgacggtcagggtctggcccgcgtcgacttcttcctgaccgacgacggcccg
gtgatcaacgagatcaacacgatgccgggcttcaccaccatctcgatgtacccgcggatg
tgggcggcgagcggcgtcgactacccgacgctgctggccaccatggtggagacggcggtc
gcccgcggcacgggcctgcgctag

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